Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU6-778P-201ENST00000363269 103 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 RNU4-91P-201ENST00000364778 135 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 SNORA29-201ENST00000384183 140 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 SNORD14D-201ENST00000384390 87 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 MIR515-2-201ENST00000384883 83 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 MIR515-1-201ENST00000384884 83 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 MIR100-201ENST00000385259 80 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 SNORA48.1-201ENST00000390879 135 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 MIR1302-8-201ENST00000408342 128 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 RN7SKP61-201ENST00000410642 295 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 RNU6-564P-201ENST00000410983 104 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 POLR2J4-204ENST00000418424 324 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL606490.4-201ENST00000423117 127 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 CR848007.2-201ENST00000424918 787 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL451062.2-201ENST00000427515 271 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 PSMA6P3-201ENST00000428242 164 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL353706.1-201ENST00000436728 494 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 GDI2P2-201ENST00000445131 608 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 RPS4XP11-201ENST00000446897 772 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC114982.1-201ENST00000469402 321 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC126389.1-201ENST00000477436 290 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC108729.1-201ENST00000487812 947 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC079140.2-201ENST00000506193 142 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC103851.1-201ENST00000506833 274 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 SNORA31.17-201ENST00000516953 127 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 DUXAP11-201ENST00000603858 526 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AL160281.1-201ENST00000605307 311 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC242628.1-201ENST00000606810 391 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC017037.3-201ENST00000625016 472 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 AC008163.1-202ENST00000636004 2889 ntBASIC0.49□□□□□ -2.33
LINC01558Q9Y6Z2 RNU1-58P-201ENST00000362413 163 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RNU1-124P-201ENST00000363861 145 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SNORD114-2-201ENST00000363953 78 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RNU6-60P-201ENST00000364792 103 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SNORD1A-201ENST00000364968 72 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SNORA40.18-201ENST00000391200 128 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 MIR1267-201ENST00000408723 78 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC127391.1-201ENST00000411737 98 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RPL26P27-201ENST00000414397 437 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RPL21P90-201ENST00000415692 466 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL135786.1-201ENST00000415892 214 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 PIGFP2-201ENST00000421400 651 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC013410.2-201ENST00000422627 201 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 NANOGP2-201ENST00000435391 727 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SNRPEP9-201ENST00000436794 238 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC027119.1-201ENST00000440877 241 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 MEMO1P3-201ENST00000459811 302 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RPS20P20-201ENST00000460498 340 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC026801.2-201ENST00000515352 425 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL731537.2-201ENST00000561565 951 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC023043.2-201ENST00000589678 1026 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 NDUFA8P1-201ENST00000605525 367 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 SNORD114-21-201ENST00000606412 72 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL022345.1-201ENST00000607292 135 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC024941.1-201ENST00000612250 334 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL136981.2-201ENST00000617319 734 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC073569.3-201ENST00000619055 682 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 MIR8063-201ENST00000621930 81 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AL138713.1-201ENST00000624026 2130 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC104820.1-201ENST00000624183 307 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC243829.7-201ENST00000633081 225 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 ICE2P2-201ENST00000483823 2787 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 AC092125.1-201ENST00000562568 1995 ntBASIC0.48□□□□□ -2.33
LINC01558Q9Y6Z2 RNU1-36P-201ENST00000365130 165 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 MIR583-201ENST00000384846 75 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 TPMTP3-201ENST00000411928 735 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 PGBD4P5-201ENST00000445958 426 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 RN7SL610P-201ENST00000463845 291 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC074250.1-201ENST00000511117 192 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms