Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL159169.1-201ENST00000421119 127 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AL360271.2-201ENST00000447710 161 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 RPS27AP10-201ENST00000496103 208 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AC104619.4-201ENST00000510773 249 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 BNIP3P6-201ENST00000549284 499 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AL138976.2-201ENST00000563989 694 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AP001094.1-201ENST00000579805 193 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AC008739.3-201ENST00000603262 127 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AL645944.1-201ENST00000603857 493 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 U2.17-201ENST00000611454 95 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AC022418.1-201ENST00000624118 445 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AP000553.6-201ENST00000641242 118 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 AC004520.1-201ENST00000608362 1413 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 OR4G1P-203ENST00000641984 1631 ntBASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A3BPQ9Y5P4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AC110491.1-201ENST00000562191 2010 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU1-105P-201ENST00000363470 161 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU4-66P-201ENST00000365199 138 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RNA5SP118-201ENST00000410385 109 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 TOMM20P4-201ENST00000427861 435 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AL627311.1-201ENST00000431514 115 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AL358232.1-201ENST00000448030 501 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RPS3AP46-201ENST00000448352 682 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RPS15AP27-201ENST00000449183 343 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AL136097.1-201ENST00000456945 913 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 RN7SKP18-201ENST00000516005 275 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 TRAV37-201ENST00000553906 342 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 HMGN2P15-201ENST00000585707 270 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AC068944.2-201ENST00000610373 403 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 AC009093.8-201ENST00000641769 292 ntBASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
COL4A3BPQ9Y5P4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL4A3BPQ9Y5P4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 Y_RNA.248-201ENST00000364501 109 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AL356057.2-201ENST00000403318 432 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 Y_RNA.623-201ENST00000411128 95 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AL353621.1-201ENST00000418219 243 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AL669831.1-202ENST00000428504 417 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 RPL21P40-201ENST00000428586 483 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC073063.1-201ENST00000434352 607 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 GTF2IP13-201ENST00000438487 386 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 CYCSP32-201ENST00000440548 321 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC098831.1-201ENST00000440661 216 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AL583843.1-201ENST00000456070 346 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC004801.2-202ENST00000463559 283 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 MTCO3P9-201ENST00000506989 781 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC074344.1-201ENST00000512823 224 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC008011.1-201ENST00000545989 227 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 DNAJC8P1-201ENST00000554535 372 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 KLKP1-201ENST00000595979 403 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 AC119674.1-207ENST00000641355 633 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms