Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-831P-201ENST00000384548 107 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 TOMM20P4-201ENST00000427861 435 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AL360271.2-201ENST00000447710 161 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AL590664.1-201ENST00000448065 339 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-864P-201ENST00000516256 108 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC087854.1-201ENST00000519706 414 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 TRAV37-201ENST00000553906 342 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR4742-201ENST00000581069 85 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR3609-201ENST00000582661 80 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AL031601.2-202ENST00000622650 282 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC012442.3-202ENST00000636742 206 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AF127577.6-201ENST00000623352 2191 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 AC005183.1-201ENST00000603687 1979 ntBASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA3Q9Y5H0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 SNORA71.3-201ENST00000362582 128 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 Y_RNA.212-201ENST00000364177 102 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-128P-201ENST00000383976 107 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR888-201ENST00000401186 77 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AP000567.1-201ENST00000406413 156 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AL158071.1-201ENST00000430315 461 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AL135752.1-201ENST00000479477 471 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC022493.1-201ENST00000492984 337 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 FGF7P4-201ENST00000509595 295 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC112206.3-201ENST00000514578 389 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC087369.1-201ENST00000520775 996 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 CYCSP30-201ENST00000546447 172 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC063950.1-201ENST00000552036 308 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC011611.1-201ENST00000552179 197 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AMZ2P1-203ENST00000565833 850 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC243960.4-201ENST00000600532 288 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AC024220.1-201ENST00000603675 484 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AL138880.2-201ENST00000616214 239 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 RMST_4.1-201ENST00000616886 107 ntBASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA3Q9Y5H0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AL136164.4-201ENST00000625013 2135 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 FTLP6-201ENST00000355274 422 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 FRG1CP-201ENST00000358464 769 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-254P-201ENST00000363377 107 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 PDCL2P1-201ENST00000419302 352 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AL159169.1-201ENST00000421119 127 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AL627311.1-201ENST00000431514 115 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC069499.1-201ENST00000489433 509 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 RPL7P47-201ENST00000497299 556 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC009901.1-201ENST00000506703 541 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 HMGB3P15-201ENST00000507326 574 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR892C-201ENST00000516410 77 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AP000889.2-201ENST00000532684 490 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC091516.1-201ENST00000549191 703 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms