Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RNA5SP252-201ENST00000391131 119 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 SNORA40C-201ENST00000391285 128 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AL353621.1-201ENST00000418219 243 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC098614.2-201ENST00000426040 255 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RPS29P31-201ENST00000446147 164 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC092798.1-201ENST00000458542 409 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RPL31P58-201ENST00000469001 379 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RPL21P99-201ENST00000480369 423 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 CCDC34P1-201ENST00000507441 517 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC112206.3-201ENST00000514578 389 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RNU2-69P-201ENST00000516061 100 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-358P-201ENST00000516564 75 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 SNORD59.2-201ENST00000516873 68 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-711P-201ENST00000517255 106 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 IGKV2-23-201ENST00000518729 323 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 BNIP3P6-201ENST00000549284 499 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 NACAP3-201ENST00000552100 481 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AL391261.3-201ENST00000557194 520 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 MIR4644-201ENST00000579929 84 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 MIR5583-1-201ENST00000580941 59 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 MIR3941-201ENST00000582572 103 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC110741.2-201ENST00000605278 268 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 AC022418.1-201ENST00000624118 445 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 MIR3662-201ENST00000637030 95 ntBASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM4Q9Y4Z0 SRP72P2-201ENST00000344851 1979 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-1283P-201ENST00000365314 105 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-328P-201ENST00000390887 106 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 PTMAP5-201ENST00000393073 333 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 SNORA57.3-201ENST00000411095 141 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC093578.1-201ENST00000415219 368 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 HMGB1P9-201ENST00000429856 646 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 ERLEC1P1-201ENST00000433806 578 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RPL23AP83-201ENST00000434984 473 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNU7-23P-201ENST00000459465 62 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RPL21P11-201ENST00000461458 483 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC069439.1-201ENST00000494739 167 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC026784.1-201ENST00000507986 352 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 SNORA31.19-201ENST00000517079 126 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNA5SP179-201ENST00000517284 121 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 CYCSP30-201ENST00000546447 172 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC078814.3-201ENST00000553036 491 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 OR11H5P-201ENST00000554039 926 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AL133241.1-201ENST00000556832 487 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 MTCO3P24-201ENST00000572729 782 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 MIR4738-201ENST00000579134 87 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC073539.2-201ENST00000597113 165 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 AC091167.4-201ENST00000605079 184 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-89P-201ENST00000606519 100 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 MAPK10-322ENST00000641485 4530 ntBASIC3.01□□□□□ -1.93
LSM4Q9Y4Z0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 MIR30B-201ENST00000384850 88 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RN7SKP156-201ENST00000410308 342 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-607P-201ENST00000411283 108 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 HSPE1P1-201ENST00000421494 318 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms