Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC106883.1-201ENST00000418805 562 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 ISCA1P1-201ENST00000426679 387 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC004854.1-201ENST00000440356 349 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC096638.1-201ENST00000444678 216 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 FABP5P15-201ENST00000453566 214 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 BTF3P12-201ENST00000519620 469 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 DEFB108A-201ENST00000530110 222 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AP004247.1-201ENST00000531556 1289 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AL355598.1-201ENST00000604169 202 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AC107294.1-201ENST00000609524 467 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 AL136313.1-201ENST00000624804 202 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.35□□□□□ -2.03
CDH9Q9ULB4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH9Q9ULB4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 UBE2L2-201ENST00000254302 429 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RNU5A-8P-201ENST00000364102 114 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RNA5SP88-201ENST00000365560 109 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RNU6-157P-201ENST00000383957 107 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RNU6-220P-201ENST00000390919 107 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RNU6-278P-201ENST00000390945 109 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AL021407.1-201ENST00000404531 386 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RPL36AP53-201ENST00000432891 316 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 LARP1BP3-201ENST00000437229 869 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AL139109.1-201ENST00000455491 297 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC026801.1-201ENST00000497178 464 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 RPF2P2-201ENST00000504693 896 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 SNORA31.3-201ENST00000516029 96 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 SNORA31.6-201ENST00000516241 130 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 SNORD19.2-201ENST00000516978 73 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC013828.2-201ENST00000532487 235 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 DUXAP1-201ENST00000556632 463 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC135628.1-201ENST00000568867 534 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 TMF1P1-201ENST00000576058 373 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC025594.3-201ENST00000613068 790 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AP002791.1-201ENST00000623291 381 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 AC091965.5-201ENST00000624785 342 ntBASIC2.34□□□□□ -2.03
CDH9Q9ULB4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH9Q9ULB4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 RNU6-931P-201ENST00000363850 107 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 RNU6-512P-201ENST00000364438 103 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 RNU6-83P-201ENST00000384568 112 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MTCO2P8-201ENST00000412213 658 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 VPS26BP1-201ENST00000417155 755 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 ZNF90P2-204ENST00000419323 1075 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MTCO2P21-201ENST00000419780 677 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AL353729.1-201ENST00000425044 720 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC104651.1-201ENST00000427559 735 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MICF-203ENST00000432679 129 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC108059.3-201ENST00000456388 214 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AL121769.1-201ENST00000469473 401 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 RPL23AP41-201ENST00000484754 458 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC023141.11-201ENST00000508864 202 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC021739.1-201ENST00000559631 174 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MIR3908-201ENST00000579798 126 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MTCO2P2-201ENST00000591258 225 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC009974.1-201ENST00000608881 455 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC087241.4-201ENST00000612441 480 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AL109620.1-201ENST00000618738 1197 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 AC006927.4-201ENST00000639187 543 ntBASIC2.33□□□□□ -2.04
CDH9Q9ULB4 MTND4P35-201ENST00000604257 1375 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms