Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC006077.1-201ENST00000604746 343 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL160290.3-201ENST00000604869 165 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL731566.2-201ENST00000618971 317 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC004925.1-201ENST00000624256 2706 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 MIR335-201ENST00000362173 94 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RNU1-44P-201ENST00000384453 163 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.555-201ENST00000384673 110 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RNU6-130P-201ENST00000411112 103 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AC079780.1-201ENST00000428259 207 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL513124.1-201ENST00000450410 614 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RN7SKP210-201ENST00000459176 261 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RPL23AP45-201ENST00000476406 468 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RPL21P13-201ENST00000488305 481 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AK3P2-201ENST00000507976 429 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 SNORA31.6-201ENST00000516241 130 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 RNA5SP360-201ENST00000516555 118 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 AC009779.6-201ENST00000603972 165 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 U3.53-201ENST00000628922 216 ntBASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL4Q9UJQ4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC068254.2-201ENST00000623938 3577 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.458-201ENST00000384240 102 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AL022722.2-201ENST00000402519 180 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 RN7SKP267-201ENST00000410381 285 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC092017.2-201ENST00000427600 362 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 MYL8P-204ENST00000431574 518 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC103996.1-201ENST00000555468 102 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 RN7SL690P-201ENST00000582087 240 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 MIR4697-201ENST00000582977 78 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 BPIFA4P-203ENST00000603168 689 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC008121.1-201ENST00000603244 268 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AC009318.2-201ENST00000610917 651 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AP001282.2-201ENST00000616149 309 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 CPHL1P-201ENST00000461341 3407 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 AL356489.2-201ENST00000566968 3528 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
SALL4Q9UJQ4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL4Q9UJQ4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL4Q9UJQ4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SALL4Q9UJQ4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SALL4Q9UJQ4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SALL4Q9UJQ4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms