Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MIR30A-201ENST00000385092 71 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC009310.1-201ENST00000414414 451 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 SFR1P2-201ENST00000421841 730 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL160275.3-201ENST00000423876 471 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC008850.1-201ENST00000427546 362 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC092170.1-201ENST00000440211 356 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL353691.1-201ENST00000451332 387 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 SUMO2P2-201ENST00000456482 255 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 HMGN2P23-201ENST00000456759 269 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC008837.1-201ENST00000511513 412 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC034114.1-201ENST00000520293 285 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC026271.5-201ENST00000577873 130 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC013412.1-201ENST00000610687 192 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 AC097655.1-201ENST00000635075 318 ntBASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COMMD3Q9UBI1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 MIR424-201ENST00000362227 98 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 RNA5SP190-201ENST00000365222 118 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 USP9YP19-201ENST00000412165 485 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 USP9YP13-201ENST00000417797 480 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 CKS1BP2-201ENST00000497342 240 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC116337.1-201ENST00000509680 687 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC025918.2-201ENST00000558683 763 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 AC013476.2-201ENST00000614456 459 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 MIR4275-201ENST00000636486 87 ntBASIC1.03□□□□□ -2.24
COMMD3Q9UBI1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 SNORD116-23-201ENST00000384645 92 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 DBF4P1-201ENST00000412976 1892 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 BTF3P8-201ENST00000414577 526 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 OR6C66P-201ENST00000414917 930 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC241584.1-201ENST00000438469 1241 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AL161788.1-201ENST00000441805 169 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AL513124.1-201ENST00000450410 614 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 USP9YP34-201ENST00000453983 808 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 SNORD97-201ENST00000459187 142 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 RPL22P13-201ENST00000493291 347 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 RPL23AP94-201ENST00000512518 302 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 SNORA48.11-201ENST00000517015 89 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC012414.2-201ENST00000559474 187 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC005261.5-201ENST00000596280 355 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AP001429.1-201ENST00000602568 530 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC091152.3-201ENST00000604227 325 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 AC024257.5-201ENST00000612739 531 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.02□□□□□ -2.25
COMMD3Q9UBI1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 SNORD115-48-201ENST00000364764 76 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 MIR561-201ENST00000385216 97 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AL121882.1-201ENST00000422893 417 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC092648.1-201ENST00000425870 423 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 MTCO1P53-201ENST00000441633 699 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 RPS20P20-201ENST00000460498 340 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC008379.1-201ENST00000463655 464 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms