Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1028P-201ENST00000517164 93 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 SNORA31.22-201ENST00000517204 135 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 RNA5SP291-201ENST00000517222 105 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 ZNF971P-201ENST00000562068 1249 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AL512347.1-201ENST00000566420 503 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 MIR4287-201ENST00000579398 78 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AP001542.2-201ENST00000593141 364 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AP001429.1-201ENST00000602568 530 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC078880.5-201ENST00000617845 421 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC107982.1-201ENST00000507171 1300 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 Y_RNA.226-201ENST00000364337 114 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC016769.3-201ENST00000396562 315 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 MIR888-201ENST00000401186 77 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 RNU2-72P-201ENST00000411175 163 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 ZNF863P-201ENST00000426746 417 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 SCARNA15.2-201ENST00000516409 127 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 MIR4421-201ENST00000578133 69 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AL596245.1-201ENST00000618994 362 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 AC068057.2-201ENST00000624047 895 ntBASIC1.42□□□□□ -2.18
CCDC88CQ9P219 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AL590233.1-201ENST00000430017 456 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 MTND2P24-201ENST00000453434 806 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC005840.1-201ENST00000498412 377 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 NDUFB4P2-201ENST00000509515 391 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC010376.1-201ENST00000522101 334 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC093510.2-201ENST00000562820 896 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC88CQ9P219 MIR4529-201ENST00000578110 78 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC103710.4-201ENST00000609301 899 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AL161423.1-201ENST00000613700 262 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC090132.2-201ENST00000615881 347 ntBASIC1.41□□□□□ -2.18
CCDC88CQ9P219 AC005539.1-201ENST00000443768 1479 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 RNU6-878P-201ENST00000384578 110 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 RNU6-220P-201ENST00000390919 107 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 MTND1P21-201ENST00000412991 285 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 TPMTP2-201ENST00000414372 726 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 NANOGP2-201ENST00000435391 727 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 FGF7P5-201ENST00000441829 291 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AL096829.2-201ENST00000446582 742 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 ANKRD26P4-201ENST00000455755 950 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC093752.1-206ENST00000511823 336 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC092451.2-201ENST00000538746 658 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC090888.1-201ENST00000561335 1141 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC103987.3-201ENST00000582071 292 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC069304.2-201ENST00000605154 435 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AL139344.1-201ENST00000605228 195 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 RNU6-1192P-201ENST00000612197 107 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 uc_338.14-201ENST00000613162 166 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 RNU6-489P-201ENST00000618289 107 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.4□□□□□ -2.18
CCDC88CQ9P219 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.4□□□□□ -2.18
CCDC88CQ9P219 AC006026.1-201ENST00000444025 1803 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 RNU6-140P-201ENST00000384566 108 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 RPL22P22-201ENST00000395439 379 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 CIR1P3-201ENST00000405137 479 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AL513475.1-201ENST00000406602 315 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 CCNG1P1-201ENST00000406783 885 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 SNORD56-201ENST00000413522 71 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC007742.1-201ENST00000425789 329 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 ELOCP26-201ENST00000436067 329 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AL353689.1-201ENST00000438895 199 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 BNIP3P2-201ENST00000441221 577 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 COX6CP18-201ENST00000448769 222 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 RPL26P9-201ENST00000457466 433 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms