Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL022722.2-201ENST00000402519 180 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RAC1P3-201ENST00000416129 580 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RPS15AP6-201ENST00000420703 385 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL158156.1-201ENST00000422509 473 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL356867.1-201ENST00000429623 299 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC097713.2-201ENST00000430199 356 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL160004.2-201ENST00000432935 350 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL645568.3-201ENST00000433683 316 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 HMGB3P30-201ENST00000457863 606 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 FTH1P2-201ENST00000466086 412 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RPS20P22-201ENST00000473700 357 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC006517.1-201ENST00000480485 328 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 SNORA31.8-201ENST00000516327 108 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RN7SKP21-201ENST00000516503 220 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC004024.1-201ENST00000549244 247 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 TRAV37-201ENST00000553906 342 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 BNIP3P16-201ENST00000589779 534 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AL591034.3-201ENST00000605511 685 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 ZYXP1-201ENST00000617638 118 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 PLCE1P1-201ENST00000622094 305 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC091925.1-201ENST00000623204 462 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
KCMF1Q9P0J7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
KCMF1Q9P0J7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.9□□□□□ -1.78
KCMF1Q9P0J7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
KCMF1Q9P0J7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 RNA5SP388-201ENST00000362584 119 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 Y_RNA.463-201ENST00000384271 102 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AL445529.1-201ENST00000398713 389 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 MIR1193-201ENST00000408109 78 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 SNORD5.1-201ENST00000458800 75 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AL160314.1-201ENST00000490836 438 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC018437.1-201ENST00000492214 406 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 RNA5SP384-201ENST00000516615 116 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 RNA5SP290-201ENST00000517133 127 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AP003122.3-201ENST00000526316 255 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC084851.1-201ENST00000529105 249 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC011494.1-201ENST00000596454 237 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 AC090132.2-201ENST00000615881 347 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 MTND5P16-201ENST00000460269 1703 ntBASIC3.9□□□□□ -1.79
KCMF1Q9P0J7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 FAM35DP-201ENST00000323387 2712 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 SNORA7.2-201ENST00000364446 145 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 MIR517A-201ENST00000385001 87 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 AL356057.3-201ENST00000402607 340 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 MIR1290-201ENST00000408735 78 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 MCFD2P1-201ENST00000417812 300 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 USMG5P1-201ENST00000425964 177 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RPL21P66-201ENST00000426566 466 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RPL23AP50-201ENST00000434149 455 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RPL21P23-201ENST00000446654 460 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RNU6-470P-201ENST00000515954 104 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RNU6-120P-201ENST00000516077 103 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 SNORA70.16-201ENST00000516390 95 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 MIR892C-201ENST00000516410 77 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.89□□□□□ -1.79
KCMF1Q9P0J7 RNU6-1137P-201ENST00000517073 99 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms