Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR5195-201ENST00000583555 115 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 SNRPGP15-201ENST00000600149 222 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC012669.1-201ENST00000603209 283 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC011373.1-201ENST00000607270 237 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AL442067.1-201ENST00000613261 223 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AL359547.2-201ENST00000615810 418 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RNU6-490P-201ENST00000362985 107 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.80-201ENST00000362996 102 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.111-201ENST00000363248 100 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 SNORD3H-201ENST00000384486 214 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 MIR218-2-201ENST00000385006 110 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RPS29P4-201ENST00000414733 161 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AL137014.1-201ENST00000420490 1226 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AL591704.1-201ENST00000432574 275 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 HMGN2P21-201ENST00000447764 270 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RN7SL271P-201ENST00000487601 295 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC078817.1-201ENST00000492623 435 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RPL29P14-201ENST00000495837 428 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC026801.1-201ENST00000497178 464 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC096745.1-201ENST00000509945 370 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RNU6-635P-201ENST00000516651 102 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RN7SKP60-201ENST00000516985 239 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RNU6-1271P-201ENST00000517049 105 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 CYCSP27-201ENST00000527643 293 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC091516.1-201ENST00000549191 703 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC113195.1-201ENST00000579952 141 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC067852.3-201ENST00000589177 561 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC174048.1-201ENST00000603389 144 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC104695.3-201ENST00000604052 296 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC104763.2-201ENST00000604179 382 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 NUTF2P8-201ENST00000604593 363 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC005344.1-201ENST00000613391 459 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AL450472.3-201ENST00000615578 367 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC004925.1-201ENST00000624256 2706 ntBASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM7Q9NR12 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 SNORD62.1-201ENST00000362541 86 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RNU6-238P-201ENST00000363313 106 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.153-201ENST00000363615 91 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 SNORA7.2-201ENST00000364446 145 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RNU6-784P-201ENST00000384330 106 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.574-201ENST00000384766 95 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.645-201ENST00000391229 102 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 Z99755.1-201ENST00000414048 380 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC080125.1-201ENST00000414888 684 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 DPH3P2-201ENST00000422618 250 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC093151.1-201ENST00000427711 313 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC004866.2-201ENST00000438285 481 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 HMGB1P12-201ENST00000438594 598 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RN7SL283P-201ENST00000489055 303 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC025554.1-201ENST00000505641 188 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC022493.2-201ENST00000506122 481 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 GMPSP1-201ENST00000514075 579 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 SCARNA16.2-201ENST00000516520 172 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RNA5SP384-201ENST00000516615 116 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC025423.5-201ENST00000550230 219 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 U3.45-201ENST00000607547 219 ntBASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PDLIM7Q9NR12 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms