Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 RPL22P17-201ENST00000438729 315 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 ELOCP7-201ENST00000439968 331 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 MRPS17P3-201ENST00000465453 385 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 RBM43P1-201ENST00000476891 1081 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 SUMO2P6-201ENST00000505273 288 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 AC008549.1-201ENST00000512900 643 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 SUB1P1-201ENST00000524415 382 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 MRPS36P5-201ENST00000551909 298 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 SNORD53-201ENST00000579969 78 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 AP001981.2-201ENST00000603241 418 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 MIR6715A-201ENST00000615929 79 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 MIR7844-201ENST00000616161 122 ntBASIC2.68□□□□□ -1.98
HPS4Q9NQG7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HPS4Q9NQG7 RNA5SP289-201ENST00000362332 137 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RNA5SP393-201ENST00000363423 117 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RNY3P13-201ENST00000365542 102 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 MIR767-201ENST00000390228 109 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AL512633.1-201ENST00000399931 655 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 MIR888-201ENST00000401186 77 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 ELOCP17-201ENST00000414751 326 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RPS6P15-201ENST00000431996 751 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 MTND1P28-201ENST00000435623 950 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 SNRPEP9-201ENST00000436794 238 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 CECR9-201ENST00000453421 199 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RPS29P20-201ENST00000489592 171 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC114786.4-201ENST00000508771 728 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AF131216.2-201ENST00000512316 564 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RNA5SP24-201ENST00000516478 95 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RNU6-759P-201ENST00000516740 103 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 RNA5SP471-201ENST00000516971 106 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 MTND2P38-201ENST00000522536 667 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC243972.3-201ENST00000539655 198 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 ZNF519P3-201ENST00000557158 1032 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC104984.5-201ENST00000586878 94 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC098826.3-201ENST00000603823 466 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AC004805.2-201ENST00000605382 482 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 AL449363.1-201ENST00000617815 186 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 CTSLP2-204ENST00000629029 392 ntBASIC2.67□□□□□ -1.98
HPS4Q9NQG7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HPS4Q9NQG7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 MIR518C-201ENST00000384822 101 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 MTCYBP36-201ENST00000404146 440 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 NDUFS5P1-201ENST00000405668 289 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 RNU4-72P-201ENST00000410754 173 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 RNU2-62P-201ENST00000410868 191 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 MTND4P20-201ENST00000424125 869 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 GTF2IP20-201ENST00000431663 360 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AL121890.1-201ENST00000435457 205 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 ZNF114P1-201ENST00000453500 292 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 RPL23AP70-201ENST00000483361 460 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 SNORA31.3-201ENST00000516029 96 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 SNORA31.18-201ENST00000517043 134 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC022616.6-201ENST00000520479 119 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC107934.1-201ENST00000522215 217 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC105129.3-201ENST00000605455 485 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 uc_338.12-201ENST00000616344 181 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC104010.1-201ENST00000616889 150 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 UCA1.1-201ENST00000620952 75 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC064859.1-201ENST00000624741 174 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms