Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VTA1Q9NP79 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC007785.2-201ENST00000598627 1916 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC002546.1-201ENST00000588041 2504 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 RNA5SP322-201ENST00000363617 119 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 Y_RNA.245-201ENST00000364493 95 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 RNU6-715P-201ENST00000365204 103 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 UBE2V1P2-201ENST00000397758 440 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AL139397.2-201ENST00000404529 772 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AC091390.3-201ENST00000426478 338 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 RPL23AP69-201ENST00000431134 458 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 RNU6-329P-201ENST00000459618 107 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 RPL21P41-201ENST00000459863 264 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 RPL32P34-201ENST00000486380 400 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 CYCSP27-201ENST00000527643 293 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 AL117336.2-201ENST00000602435 335 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 C8orf59P2-201ENST00000603441 271 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 AL355365.1-201ENST00000616480 294 ntBASIC4.1□□□□□ -1.75
VTA1Q9NP79 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.1□□□□□ -1.75
VTA1Q9NP79 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTA1Q9NP79 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VTA1Q9NP79 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VTA1Q9NP79 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VTA1Q9NP79 RNU1-33P-201ENST00000364249 162 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RNU6-371P-201ENST00000364283 108 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 SNORD81.2-201ENST00000365153 76 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 Y_RNA.378-201ENST00000365652 113 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RNU6-395P-201ENST00000365662 106 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 SNORA32.2-201ENST00000384049 122 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RNU6-1197P-201ENST00000391183 107 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 HSPE1P1-201ENST00000421494 318 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 Z82210.1-201ENST00000440037 231 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RN7SL601P-201ENST00000471221 293 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 SNORA19.2-201ENST00000516013 114 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RNU6-1315P-201ENST00000517187 99 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 NARSP2-201ENST00000518524 679 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 BTF3P12-201ENST00000519620 469 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 RAB11AP2-201ENST00000545905 639 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 MIR548AC-201ENST00000585049 88 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC092747.3-201ENST00000603769 301 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 AC022418.1-201ENST00000624118 445 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 AP003400.5-201ENST00000624827 617 ntBASIC4.09□□□□□ -1.75
VTA1Q9NP79 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.09□□□□□ -1.75
VTA1Q9NP79 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VTA1Q9NP79 MIR423-201ENST00000362201 94 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 Y_RNA.414-201ENST00000384011 101 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RNU1-89P-201ENST00000384592 164 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 Z98941.1-201ENST00000407764 100 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 AL669831.1-202ENST00000428504 417 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.08□□□□□ -1.76
VTA1Q9NP79 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VTA1Q9NP79 GTF2IP13-201ENST00000438487 386 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RPS24P13-201ENST00000442520 397 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 FABP5P15-201ENST00000453566 214 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC008155.2-201ENST00000464337 397 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 MTCO1P29-201ENST00000496868 288 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 MTCO3P9-201ENST00000506989 781 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RNU2-69P-201ENST00000516061 100 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RNU7-30P-201ENST00000516835 62 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 RNA5SP290-201ENST00000517133 127 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC107953.1-201ENST00000522216 297 ntBASIC4.08□□□□□ -1.76
VTA1Q9NP79 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms