Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC097478.2-201ENST00000610572 514 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 uc_338.14-201ENST00000613162 166 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC012640.5-201ENST00000623897 319 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL691447.3-201ENST00000635020 330 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 DDX43P2-201ENST00000604753 1354 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 RNU6-778P-201ENST00000363269 103 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 U8.8-201ENST00000365399 135 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 DPH3P2-201ENST00000422618 250 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 TXNL1P1-201ENST00000429528 554 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 MTND1P28-201ENST00000435623 950 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 CECR9-201ENST00000453421 199 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC072039.1-201ENST00000477611 581 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 RNU6-311P-201ENST00000516224 102 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 DUXAP1-201ENST00000556632 463 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 UBE2L4-201ENST00000587688 464 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC008121.1-201ENST00000603244 268 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC112220.3-201ENST00000605502 502 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC090186.1-201ENST00000605991 572 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AL161423.1-201ENST00000613700 262 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AL607023.1-201ENST00000620045 248 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AL158801.5-201ENST00000623123 465 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 AC079416.3-201ENST00000624479 549 ntBASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
TM9SF3Q9HD45 RNU6-433P-201ENST00000363216 104 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 RNU6-853P-201ENST00000364306 107 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 RNU6-157P-201ENST00000383957 107 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 U3.37-201ENST00000408528 213 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 U6atac.2-201ENST00000408644 118 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 USP9YP27-201ENST00000418455 438 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AL445669.1-201ENST00000426743 755 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MTND1P32-201ENST00000433043 938 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 FABP5P14-201ENST00000437273 393 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 PGBD4P3-201ENST00000440731 581 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 IPO7P1-201ENST00000442031 636 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC124916.1-201ENST00000444020 547 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MTCO1P27-201ENST00000448269 226 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 OR6C5P-201ENST00000452388 923 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 LTV1P1-201ENST00000510683 1237 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 RNU6-237P-201ENST00000515985 71 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MIR3167-201ENST00000579623 85 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MIR4524B-201ENST00000581569 115 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AL596327.1-201ENST00000603629 213 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 U2.21-201ENST00000637295 81 ntBASIC2.38□□□□□ -2.03
TM9SF3Q9HD45 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 FAM133CP-201ENST00000332869 704 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AL162578.1-201ENST00000406202 378 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 RN7SKP158-201ENST00000410453 326 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 TOMM20P4-201ENST00000427861 435 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC020550.1-201ENST00000447385 163 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AP000542.1-201ENST00000448473 371 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 DYNLL1P5-201ENST00000467158 270 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC092436.1-201ENST00000506450 503 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 RNA5SP165-201ENST00000517142 115 ntBASIC2.37□□□□□ -2.03
TM9SF3Q9HD45 AC093012.1-202ENST00000549403 582 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms