Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 ELOCP23-201ENST00000452014 332 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL356010.1-201ENST00000456364 102 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC105417.1-201ENST00000514691 285 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RNU1-103P-201ENST00000516502 125 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL512360.1-201ENST00000555346 234 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 ZNF519P2-201ENST00000557032 169 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 MIR1273C-201ENST00000578669 77 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 HMGN2P15-201ENST00000585707 270 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC080078.2-201ENST00000603766 501 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AP001596.2-201ENST00000608410 312 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC017083.3-201ENST00000609955 700 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL354950.2-201ENST00000617939 290 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AC011155.2-201ENST00000623202 216 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 CKAP2P1-201ENST00000555477 2049 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 MTND4P14-201ENST00000435799 1354 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 ELF2P3-201ENST00000445099 1506 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 RNU6-996P-201ENST00000365438 107 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 SNORA4.3-201ENST00000365564 137 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.372-201ENST00000365599 102 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 MIR181A1-201ENST00000385026 110 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 SNORD37.1-201ENST00000390968 65 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 RNA5SP229-201ENST00000410809 99 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 OR6C66P-201ENST00000414917 930 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC063979.1-201ENST00000415539 377 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL158156.1-201ENST00000422509 473 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL160275.3-201ENST00000423876 471 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL353729.1-201ENST00000425044 720 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC098614.2-201ENST00000426040 255 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL606489.2-201ENST00000433886 234 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL596276.1-201ENST00000434465 418 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC098831.1-201ENST00000440661 216 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 BRK1P2-201ENST00000442875 223 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC104058.1-201ENST00000448028 297 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC139453.3-201ENST00000493276 369 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 EIF4EP3-201ENST00000498782 656 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 OR5BN1P-201ENST00000532955 829 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC005498.1-201ENST00000592125 465 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC126118.1-201ENST00000607744 628 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC068792.1-201ENST00000621354 417 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
BRF2Q9HAW0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRF2Q9HAW0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
BRF2Q9HAW0 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RPL17P50-201ENST00000396131 546 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RPL7P46-201ENST00000425129 740 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RPS15AP5-201ENST00000436276 388 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 CYCSP32-201ENST00000440548 321 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RNU6-703P-201ENST00000516946 107 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 RNU6-685P-201ENST00000517088 95 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms