Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MIR4716-201ENST00000579628 84 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC024153.1-201ENST00000603103 365 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC108738.1-201ENST00000603703 237 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC012368.3-201ENST00000604190 219 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 FAM27E2-201ENST00000619668 403 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 MIR6844-201ENST00000637122 62 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RNU6-873P-201ENST00000363833 107 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SNORA51.8-201ENST00000384234 132 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SNORA70E-201ENST00000384492 135 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SNORD56.6-201ENST00000384569 71 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SNORA48.4-201ENST00000391089 134 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RNU2-54P-201ENST00000410299 190 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AL035422.1-201ENST00000414193 397 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC098614.2-201ENST00000426040 255 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RPS26P47-201ENST00000427219 348 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RPL7AP49-201ENST00000429522 581 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AL591438.1-201ENST00000433508 581 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RPL19P16-201ENST00000433839 588 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AZGP1P2-201ENST00000454506 345 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 RPL32P33-201ENST00000487023 394 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC091912.1-201ENST00000511351 248 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 MIR3646-201ENST00000578301 84 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 MIR4260-201ENST00000583107 67 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC005255.1-201ENST00000593748 216 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC024581.2-201ENST00000619986 252 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 uc_338.7-201ENST00000621834 124 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AL136228.1-201ENST00000622221 319 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 SCN1A-220ENST00000641603 12506 ntBASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP4Q9BWG4 MTND5P35-201ENST00000557537 1720 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 snoU2_19.4-201ENST00000364329 80 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 Y_RNA.293-201ENST00000364908 93 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RNA5SP223-201ENST00000365174 120 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 COX5BP7-201ENST00000414780 274 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AC007919.1-201ENST00000429380 217 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RPEP4-201ENST00000437636 602 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL121914.1-201ENST00000450188 156 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL132838.2-201ENST00000492041 314 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RN7SL57P-201ENST00000493687 290 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RNU6-1007P-201ENST00000516586 107 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RNA5SP54-201ENST00000516951 92 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms