Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNA5SP112-201ENST00000515937 99 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RNU7-193P-201ENST00000516723 65 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC006199.1-201ENST00000548728 219 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC025165.5-201ENST00000602802 578 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC091152.3-201ENST00000604227 325 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 RPL21P136-201ENST00000605378 396 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC107294.1-201ENST00000609524 467 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC092574.1-201ENST00000609771 420 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC011939.3-201ENST00000613686 466 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AP000676.3-201ENST00000623299 569 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 AC007490.1-201ENST00000624321 703 ntBASIC1.5□□□□□ -2.17
UPK3BQ9BT76 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
UPK3BQ9BT76 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 RNU6-658P-201ENST00000384606 106 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 MIR17-201ENST00000385012 84 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 MIR320C1-201ENST00000408566 88 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 RNA5SP270-201ENST00000411361 118 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 USP9YP33-201ENST00000412220 421 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 USP9YP11-201ENST00000427537 717 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC093106.2-201ENST00000428212 385 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 RPL36AP53-201ENST00000432891 316 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 USP9YP35-201ENST00000435696 412 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC016691.1-201ENST00000441321 413 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC108729.1-201ENST00000487812 947 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 RPL22P13-201ENST00000493291 347 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC034222.1-201ENST00000494052 532 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 RNU2-44P-201ENST00000516795 194 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC118273.2-201ENST00000532092 465 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC098826.3-201ENST00000603823 466 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC012493.3-201ENST00000604494 112 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL161798.1-201ENST00000604630 131 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL121917.1-203ENST00000605534 577 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC006270.3-201ENST00000605967 1036 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL133445.2-201ENST00000611191 527 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AL162373.1-201ENST00000620433 407 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 PCMTD1P7-201ENST00000634506 357 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 AC097655.1-201ENST00000635075 318 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 LINC02211-204ENST00000642024 1070 ntBASIC1.49□□□□□ -2.17
UPK3BQ9BT76 HSPA8P4-201ENST00000511877 1920 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 RNU6-413P-201ENST00000384115 107 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 RNU6-1257P-201ENST00000384625 110 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL021407.1-201ENST00000404531 386 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 MTCO1P17-201ENST00000411522 491 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 MTATP6P30-201ENST00000443540 664 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC007327.1-201ENST00000447461 264 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 ZNF886P-201ENST00000450781 723 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL441985.1-201ENST00000457727 251 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC005410.1-202ENST00000460347 485 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC092436.1-201ENST00000506450 503 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC008526.1-201ENST00000509149 338 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AF213884.2-201ENST00000510417 903 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC109445.1-201ENST00000512356 383 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL121821.2-201ENST00000556081 394 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL133153.1-201ENST00000557756 303 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC008749.1-201ENST00000597650 306 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC091057.3-201ENST00000602684 733 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC068276.1-201ENST00000605793 379 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC004908.2-201ENST00000609090 574 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 AC104454.1-201ENST00000421341 1401 ntBASIC1.48□□□□□ -2.17
UPK3BQ9BT76 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK3BQ9BT76 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RNU1-148P-201ENST00000384472 162 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RNU6-253P-201ENST00000384730 105 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 MIR1261-201ENST00000408659 82 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RNU2-63P-201ENST00000410792 194 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 USP9YP6-201ENST00000413550 854 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms