Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC090615.1-201ENST00000577519 154 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR5685-201ENST00000579080 79 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 HMGB1P50-201ENST00000605814 607 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 ATP5A1P2-202ENST00000616464 443 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL596245.1-201ENST00000618994 362 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL773545.4-201ENST00000637262 310 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL513478.4-201ENST00000641636 310 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC233263.6-201ENST00000631132 1963 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP391-201ENST00000363456 119 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-82P-201ENST00000363970 107 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-806P-201ENST00000365147 105 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORA3.3-201ENST00000408712 125 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-101P-201ENST00000410323 104 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 ATG3P1-201ENST00000419507 911 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 USP9YP30-201ENST00000430729 455 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 FTH1P25-201ENST00000447665 469 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AL359073.1-201ENST00000448036 403 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC108059.3-201ENST00000456388 214 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1132P-201ENST00000459214 107 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC087884.1-201ENST00000469738 328 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AP002812.1-201ENST00000495378 474 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 GZMAP1-201ENST00000503054 631 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 FTH1P9-201ENST00000513251 355 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU2-53P-201ENST00000516257 147 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU2-10P-201ENST00000516375 211 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORD116.3-201ENST00000517176 78 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AL133153.1-201ENST00000557756 303 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC125232.2-201ENST00000592457 143 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AL590099.1-201ENST00000615276 138 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AL591424.2-201ENST00000617023 128 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 AC091925.2-201ENST00000625059 256 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 MAPK10-373ENST00000641983 6772 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 TPTE2P4-201ENST00000258589 1605 ntBASIC4.1□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-490P-201ENST00000362985 107 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORD82-201ENST00000365530 70 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU5E-6P-201ENST00000365574 115 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.428-201ENST00000384078 102 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.461-201ENST00000384263 103 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.493-201ENST00000384422 102 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-328P-201ENST00000390887 106 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 MTCO2P33-201ENST00000402100 465 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RN7SKP202-201ENST00000410439 330 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RN7SKP159-201ENST00000410657 292 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 MTND5P15-201ENST00000434246 349 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 USP9YP7-201ENST00000436723 430 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS29P7-201ENST00000439662 171 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC011816.1-201ENST00000441346 546 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 CHEK2P4-201ENST00000450340 246 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 PPIAP3-201ENST00000450588 505 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 USP9YP32-201ENST00000452432 430 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AP000873.1-201ENST00000463987 400 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC087879.1-201ENST00000474343 374 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC116655.1-201ENST00000508324 901 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC087369.1-201ENST00000520775 996 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 HSPE1P5-201ENST00000561489 272 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL23AP84-201ENST00000571193 464 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms