Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU7-197P-201ENST00000458836 62 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 DUTP1-201ENST00000493631 470 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 HMGB3P16-201ENST00000508037 287 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 SNORA40.9-201ENST00000515895 93 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 RN7SKP179-201ENST00000516126 217 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 RN7SKP260-201ENST00000516907 149 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 MIR4660-201ENST00000583549 74 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC023043.3-201ENST00000593113 385 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 KLKP1-201ENST00000595979 403 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC006115.2-201ENST00000596823 202 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 AC008814.1-201ENST00000603797 406 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 MIR3658-201ENST00000636291 56 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 NCAPGP1-201ENST00000505112 1814 ntBASIC5□□□□□ -1.61
CNTNAP3BQ96NU0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 Y_RNA.172-201ENST00000363765 102 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 SNORD73B-201ENST00000364394 72 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 MIR483-201ENST00000385070 76 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 MIR105-1-201ENST00000385222 81 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 SNORA40.19-201ENST00000390846 128 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 LAP3P1-201ENST00000403648 294 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 Z82188.1-201ENST00000436709 154 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 USP9YP7-201ENST00000436723 430 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 USP9YP32-201ENST00000452432 430 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 RNU7-107P-201ENST00000459121 61 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC117440.1-201ENST00000474107 571 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC012158.1-204ENST00000483430 465 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP230-201ENST00000517039 122 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC008694.2-201ENST00000517591 306 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 MIR4431-201ENST00000579990 94 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 SNORD84-203ENST00000584275 78 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC073869.8-201ENST00000641806 335 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AC022893.2-201ENST00000564832 3296 ntBASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3BQ96NU0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP197-201ENST00000363357 119 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP428-201ENST00000365129 132 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-741P-201ENST00000383889 107 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP213-201ENST00000391031 106 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 GNG5P5-201ENST00000420444 220 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 AC063976.4-201ENST00000421971 163 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 WARS2P1-201ENST00000429678 537 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RPS15AP7-201ENST00000439294 405 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RN7SKP288-201ENST00000516227 268 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 RNA5SP76-201ENST00000516277 87 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 MIR892C-201ENST00000516410 77 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 Y_RNA.712-201ENST00000517011 92 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 MIR2116-201ENST00000517221 80 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 MIR6853-201ENST00000619642 74 ntBASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.98□□□□□ -1.61
CNTNAP3BQ96NU0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms