Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL365184.2-201ENST00000431139 435 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RPL36AP53-201ENST00000432891 316 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 NEFMP1-201ENST00000443423 1006 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 OSTCP8-201ENST00000445117 448 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC098591.2-201ENST00000510152 315 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RNU6-1129P-201ENST00000515964 104 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RNU6-703P-201ENST00000516946 107 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC022616.6-201ENST00000520479 119 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC107934.1-201ENST00000522215 217 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AL358072.1-201ENST00000604156 575 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 MIR7844-201ENST00000616161 122 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AL356266.1-201ENST00000623311 483 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC243829.7-201ENST00000633081 225 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AL445523.1-201ENST00000451184 1362 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 RNU4-82P-201ENST00000362443 140 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 RNU5A-2P-201ENST00000384337 116 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC068587.2-201ENST00000478386 781 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC022447.1-201ENST00000515358 464 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC025881.1-201ENST00000518851 512 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 COX6CP5-201ENST00000527162 228 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 MIR3118-1-201ENST00000581787 76 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AP001981.2-201ENST00000603241 418 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC103710.2-201ENST00000609912 942 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC004223.4-201ENST00000612426 332 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC068057.2-201ENST00000624047 895 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 MIR3199-2-201ENST00000636243 86 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC010889.1-201ENST00000566193 2666 ntBASIC2.67□□□□□ -1.98
ZNF560Q96MR9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF560Q96MR9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 DPPA3P1-201ENST00000448050 469 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 RNU6-953P-201ENST00000459154 107 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC128713.1-201ENST00000471495 306 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 TRBV1-201ENST00000476502 284 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 RNU2-10P-201ENST00000516375 211 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 ZNF519P3-201ENST00000557158 1032 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC007151.1-201ENST00000572774 483 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC090616.3-201ENST00000582184 217 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC104763.2-201ENST00000604179 382 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC007363.1-201ENST00000604736 620 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AP000860.1-201ENST00000605250 559 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 AC017037.3-201ENST00000625016 472 ntBASIC2.66□□□□□ -1.98
ZNF560Q96MR9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
ZNF560Q96MR9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
ZNF560Q96MR9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms