Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RNU6-1178P-201ENST00000516674 107 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RNU6-572P-201ENST00000516724 80 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 MTND4LP26-201ENST00000518144 282 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 IGHV3-76-201ENST00000522465 295 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AL137161.1-201ENST00000532231 390 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 DNAJC8P1-201ENST00000554535 372 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 MTCO3P24-201ENST00000572729 782 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 HMGN2P15-201ENST00000585707 270 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 KLKP1-201ENST00000595979 403 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 SNORA51-201ENST00000606420 132 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 YWHAEP7-203ENST00000622054 312 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 FER-210ENST00000628534 558 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC138Q96M89 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
CCDC138Q96M89 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC138Q96M89 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC138Q96M89 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC138Q96M89 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC138Q96M89 RNU6-525P-201ENST00000363685 104 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 RNU6-658P-201ENST00000384606 106 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 SNORD115-47-201ENST00000391226 86 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 SNORA40C-201ENST00000391285 128 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AL606923.1-201ENST00000406616 190 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 RNU6-908P-201ENST00000410160 94 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 HSPE1P1-201ENST00000421494 318 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC007560.1-201ENST00000426912 237 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 RPL21P40-201ENST00000428586 483 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 MYL8P-204ENST00000431574 518 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 RNU7-180P-201ENST00000459240 63 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC104472.2-201ENST00000469035 601 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC128713.1-201ENST00000471495 306 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC138Q96M89 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC112206.3-201ENST00000514578 389 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 SNORA31.19-201ENST00000517079 126 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC008011.1-201ENST00000545989 227 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC015917.1-201ENST00000579654 510 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 NUTF2P8-201ENST00000604593 363 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 AC010338.1-201ENST00000621823 717 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 AL732372.2-225ENST00000642124 456 ntBASIC3.58□□□□□ -1.84
CCDC138Q96M89 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC138Q96M89 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC138Q96M89 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC138Q96M89 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC138Q96M89 MIR412-201ENST00000362142 91 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 RNU6-799P-201ENST00000363567 107 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 RNU6-715P-201ENST00000365204 103 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 Y_RNA.453-201ENST00000384223 109 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 RNU6-1179P-201ENST00000384667 107 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AL136116.1-201ENST00000403591 381 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 BTF3P7-201ENST00000407097 488 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 RN7SKP202-201ENST00000410439 330 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 BPY2DP-201ENST00000422208 265 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 GTF2IP20-201ENST00000431663 360 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC000111.3-201ENST00000433478 193 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 SCARNA18-201ENST00000459004 134 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 RPL23AP11-201ENST00000475260 469 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC008716.1-201ENST00000511084 513 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 MTND4P7-201ENST00000523876 130 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 MTND1P35-201ENST00000526739 508 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 AP000889.1-201ENST00000530968 660 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC106782.4-201ENST00000568264 210 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 MIR4782-201ENST00000577987 79 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC107304.1-201ENST00000604229 296 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC138Q96M89 AC039056.2-201ENST00000622261 511 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 MIR3688-2-201ENST00000636963 87 ntBASIC3.57□□□□□ -1.84
CCDC138Q96M89 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms