Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 MIR148B-201ENST00000362252 99 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 Y_RNA.67-201ENST00000362870 100 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 SNORD70.1-201ENST00000391007 85 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RNU6-510P-201ENST00000391239 108 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AL445189.1-201ENST00000405722 338 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RNU4-14P-201ENST00000410858 122 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RNA5SP111-201ENST00000411386 101 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC126124.2-201ENST00000413542 321 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AL451054.2-201ENST00000420896 202 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AL669831.1-202ENST00000428504 417 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 SETP5-201ENST00000437270 562 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 GTF2IP13-201ENST00000438487 386 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 HMGB1P18-201ENST00000438801 619 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 HSFY6P-201ENST00000445573 403 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC233279.1-201ENST00000455300 423 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 PPP1R2P5-201ENST00000457256 603 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RPL23AP11-201ENST00000475260 469 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC078817.1-201ENST00000492623 435 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 VN1R104P-201ENST00000505115 1009 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RNU6-273P-201ENST00000516937 96 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 RNA5SP471-201ENST00000516971 106 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 CYCSP30-201ENST00000546447 172 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC011611.1-201ENST00000552179 197 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 OR11H5P-201ENST00000554039 926 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 ZNF192P1-203ENST00000565888 810 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 MIR4719-201ENST00000585233 84 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC104763.2-201ENST00000604179 382 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC022893.3-201ENST00000607665 437 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 AL355810.1-201ENST00000614629 552 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 U4.6-201ENST00000621618 127 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 MIR6810-201ENST00000622701 70 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 MTND5P42-201ENST00000637720 498 ntBASIC2.63□□□□□ -1.99
LINC00479Q96M42 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00479Q96M42 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
LINC00479Q96M42 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL365440.1-201ENST00000436135 2167 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 SPRR2C-201ENST00000290702 219 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 RNU5A-1-201ENST00000362698 116 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 SNORA4.3-201ENST00000365564 137 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 MIR514A1-201ENST00000385133 98 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 RNU2-37P-201ENST00000410695 177 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 RNU6-1304P-201ENST00000411374 106 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 POLHP1-201ENST00000411806 470 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 RPS12P24-201ENST00000412619 387 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 BX682237.1-201ENST00000415016 335 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC009161.1-201ENST00000417306 376 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 DBIP2-201ENST00000419076 262 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 BX842559.1-201ENST00000419615 532 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 HSPE1P1-201ENST00000421494 318 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL451062.2-201ENST00000427515 271 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL117339.2-201ENST00000430475 180 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL365400.1-201ENST00000431854 640 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC091390.1-201ENST00000433904 331 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AL121871.1-201ENST00000443413 436 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 RPL23AP67-201ENST00000465341 474 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC068657.1-201ENST00000520807 306 ntBASIC2.62□□□□□ -1.99
LINC00479Q96M42 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00479Q96M42 RANP3-201ENST00000530970 276 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms