Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 AC116096.1-201ENST00000566804 2314 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 SNORD73B-201ENST00000364394 72 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 RNU6-1180P-201ENST00000364935 107 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 Y_RNA.333-201ENST00000365274 102 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 SNORA40C-201ENST00000391285 128 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 RNU6-1199P-201ENST00000411249 104 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 snoU109.2-201ENST00000459316 135 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 AC091874.1-201ENST00000511402 339 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 SNORA67.7-201ENST00000516664 135 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 RNA5SP143-201ENST00000516936 115 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 RNU6-58P-201ENST00000517143 103 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 RN7SL690P-201ENST00000582087 240 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 AC024220.1-201ENST00000603675 484 ntBASIC5.6□□□□□ -1.51
LRCH3Q96II8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.6□□□□□ -1.51
LRCH3Q96II8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRCH3Q96II8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRCH3Q96II8 RNU6-1249P-201ENST00000363237 111 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 RN7SKP224-201ENST00000364140 325 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 SNORA29-201ENST00000384183 140 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 RNU6-166P-201ENST00000384371 107 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 Y_RNA.495-201ENST00000384435 112 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 MIR1182-201ENST00000408363 97 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC138623.1-201ENST00000418060 216 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC138761.5-201ENST00000433967 325 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 RPL36AP41-201ENST00000493820 306 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 RNU6-155P-201ENST00000516347 100 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 SNORA31.19-201ENST00000517079 126 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 NACAP3-201ENST00000552100 481 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 ZNF192P1-203ENST00000565888 810 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC024153.1-201ENST00000603103 365 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AC108081.1-201ENST00000604358 221 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 RNA5SP439-201ENST00000617595 124 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 ZYXP1-201ENST00000617638 118 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 AL034408.1-202ENST00000636088 415 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRCH3Q96II8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.59□□□□□ -1.51
LRCH3Q96II8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRCH3Q96II8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LRCH3Q96II8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LRCH3Q96II8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LRCH3Q96II8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LRCH3Q96II8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
LRCH3Q96II8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRCH3Q96II8 RNU6-137P-201ENST00000363680 108 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 RNU6-407P-201ENST00000365280 104 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 SNORA40.5-201ENST00000391061 128 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 RNY4P30-201ENST00000410216 95 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 RNU6-603P-201ENST00000411403 107 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.58□□□□□ -1.52
LRCH3Q96II8 AC010095.1-201ENST00000443543 144 ntBASIC5.58□□□□□ -1.52
LRCH3Q96II8 AC124916.1-201ENST00000444020 547 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms