Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RPL23AP69-201ENST00000431134 458 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 ELOCP7-201ENST00000439968 331 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC092473.1-201ENST00000441098 221 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC010099.1-201ENST00000455434 375 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 RNU7-182P-201ENST00000459009 62 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 RNU7-63P-201ENST00000459054 62 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC025518.1-201ENST00000479856 347 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 FCF1P8-201ENST00000510322 597 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 ADI1P3-201ENST00000549509 470 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 HMGB1P6-201ENST00000569046 646 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC174048.1-201ENST00000603389 144 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AL161798.1-201ENST00000604630 131 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC017083.3-201ENST00000609955 700 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 AC012409.4-201ENST00000612923 249 ntBASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SH3KBP1Q96B97 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 CKAP2P1-201ENST00000555477 2049 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 SNORD115-7-201ENST00000365306 82 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNU6-116P-201ENST00000384042 109 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNU6-1029P-201ENST00000384109 107 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNU6-817P-201ENST00000391083 104 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNU6-1158P-201ENST00000391167 107 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 SNORD115-47-201ENST00000391226 86 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNU6-648P-201ENST00000410190 107 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 USP9YP6-201ENST00000413550 854 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 OR51A5P-201ENST00000415429 942 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC012498.1-201ENST00000424037 437 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 SAR1AP4-201ENST00000429225 591 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 ELOCP23-201ENST00000452014 332 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RPL12P25-201ENST00000455592 494 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC092989.1-201ENST00000481235 277 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC233702.1-201ENST00000482905 502 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC019235.1-201ENST00000503847 207 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 SNORD27.1-201ENST00000516319 72 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 RNA5SP503-201ENST00000517047 117 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC136619.2-201ENST00000563361 631 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 MIR4775-201ENST00000581168 75 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 MTATP6P3-201ENST00000581686 676 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 BNIP3P9-201ENST00000603714 553 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 AC011155.2-201ENST00000623202 216 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 Z99571.1-201ENST00000636677 394 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SH3KBP1Q96B97 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 RNU6-483P-201ENST00000384088 108 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 SNORD17-201ENST00000390930 237 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 HMGN2P30-201ENST00000423237 256 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC092047.1-201ENST00000424997 240 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 GPM6BP2-201ENST00000432046 144 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 GPM6BP1-201ENST00000446387 144 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 MTND1P18-201ENST00000448191 573 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 FDX1P2-201ENST00000450769 375 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 RPL39P36-201ENST00000490784 156 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC092436.1-201ENST00000506450 503 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 SNORA31.26-201ENST00000517250 137 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms