Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC47Q96A33 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC47Q96A33 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC47Q96A33 RNA5SP24-201ENST00000516478 95 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC023050.2-201ENST00000544968 387 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 EIF4BP1-201ENST00000554881 351 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 ROCK1P1-201ENST00000573767 549 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 MIR5694-201ENST00000581190 76 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 MIR4307-201ENST00000582802 84 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC47Q96A33 KC877982.1-201ENST00000602313 470 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 AL031281.1-201ENST00000604049 488 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC007621.1-201ENST00000604544 437 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC069294.1-201ENST00000608397 350 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC092106.3-201ENST00000611308 722 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC021755.4-201ENST00000616620 456 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC47Q96A33 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC47Q96A33 ZNF876P-202ENST00000398732 1485 ntBASIC2.69□□□□□ -1.98
CCDC47Q96A33 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC47Q96A33 AC104454.1-201ENST00000421341 1401 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 Y_RNA.302-201ENST00000364997 102 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC47Q96A33 SNORD23.1-201ENST00000408212 104 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 NUP35P1-201ENST00000422734 947 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AL022400.1-201ENST00000423946 935 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 BX276092.3-201ENST00000424182 230 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 EIF4EP4-201ENST00000424916 578 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 PTGES3P4-201ENST00000426243 356 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 MTND1P20-201ENST00000430341 950 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 PGBD4P3-201ENST00000440731 581 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AL831737.1-201ENST00000441288 271 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC096576.1-201ENST00000489014 359 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC112673.1-201ENST00000513168 575 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 MIR892C-201ENST00000516410 77 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 RNU5A-4P-201ENST00000516588 111 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AL049838.1-201ENST00000563647 981 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC105137.2-201ENST00000569073 466 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AL645944.1-201ENST00000603857 493 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC007363.1-201ENST00000604736 620 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC105148.1-201ENST00000604961 409 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC067747.1-201ENST00000608026 250 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 uc_338.14-201ENST00000613162 166 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 AC025048.6-202ENST00000627667 438 ntBASIC2.68□□□□□ -1.98
CCDC47Q96A33 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC47Q96A33 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC47Q96A33 AL359854.1-201ENST00000614203 1594 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 Y_RNA.46-201ENST00000362695 102 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNU6-288P-201ENST00000363690 104 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 SNORA5B-201ENST00000363786 132 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNU6-188P-201ENST00000364207 107 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNA5SP125-201ENST00000364843 120 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 AL355497.1-201ENST00000406262 551 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 NPM1P11-201ENST00000417106 855 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RAC1P6-201ENST00000423911 575 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC092001.1-201ENST00000453012 261 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 MTCO1P42-201ENST00000457379 726 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AP001324.2-201ENST00000461163 319 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNU6-581P-201ENST00000516214 105 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNU6-143P-201ENST00000516942 93 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RNU6-1183P-201ENST00000517054 60 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RPS3AP4-201ENST00000555161 764 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC074050.1-201ENST00000563247 211 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC061975.8-201ENST00000587058 721 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 NRBF2P1-201ENST00000587407 859 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 BNIP3P9-201ENST00000603714 553 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AL358072.1-201ENST00000604156 575 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC013244.3-201ENST00000605614 388 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 AC107214.2-201ENST00000608204 634 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 MIR6840-201ENST00000611937 71 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 MIR1291-201ENST00000627649 87 ntBASIC2.67□□□□□ -1.98
CCDC47Q96A33 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC47Q96A33 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC47Q96A33 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms