Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
PTP4A1Q93096 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC073346.2-201ENST00000624724 2058 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RNU6-1072P-201ENST00000384703 107 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RNU6-443P-201ENST00000384780 107 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RNU6-920P-201ENST00000410926 92 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC009518.2-201ENST00000418056 731 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 ELOCP4-201ENST00000420090 333 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AL109913.1-201ENST00000421173 514 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 UBE2D3P4-201ENST00000441973 436 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 USP9YP15-201ENST00000442391 422 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC009961.3-201ENST00000449832 765 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 BZW1P2-201ENST00000473537 826 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC116655.1-201ENST00000508324 901 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RNU6-581P-201ENST00000516214 105 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RN7SKP272-201ENST00000516988 232 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 RNU6-232P-201ENST00000517144 64 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 HMGB1P41-201ENST00000520234 440 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 PSMA2P1-201ENST00000526365 646 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC009163.5-201ENST00000575421 637 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC105245.1-201ENST00000581934 244 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC122133.1-201ENST00000613964 233 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 Z99129.2-201ENST00000619967 314 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC079248.2-201ENST00000623779 326 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 AC026422.1-201ENST00000623961 452 ntBASIC2.64□□□□□ -1.99
PTP4A1Q93096 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
PTP4A1Q93096 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTP4A1Q93096 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC093536.2-201ENST00000565257 1406 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC138393.1-203ENST00000327086 343 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 RPL9P7-201ENST00000330965 580 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 SNORA54-201ENST00000384281 123 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 Y_RNA.598-201ENST00000410480 95 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC093106.2-201ENST00000428212 385 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 RPS24P1-201ENST00000438550 371 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 RPS15AP9-201ENST00000439856 381 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC117440.1-201ENST00000474107 571 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 RPS29P2-201ENST00000479278 136 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 Y_RNA.689-201ENST00000516589 107 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC009902.1-201ENST00000519351 183 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTP4A1Q93096 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 CYCSP39-201ENST00000565821 309 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 MIR5195-201ENST00000583555 115 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC018638.7-201ENST00000605836 1114 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC092354.1-201ENST00000606057 376 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 MIR3670-4-201ENST00000612260 65 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 HMGB1P24-202ENST00000615653 685 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC108479.2-201ENST00000617314 601 ntBASIC2.63□□□□□ -1.99
PTP4A1Q93096 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.63□□□□□ -1.99
PTP4A1Q93096 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PTP4A1Q93096 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PTP4A1Q93096 Y_RNA.560-201ENST00000384689 102 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 SNORA40C-201ENST00000391285 128 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 OR51A5P-201ENST00000415429 942 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 AP000705.1-201ENST00000454567 350 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC027673.1-201ENST00000456245 405 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 AP001324.2-201ENST00000461163 319 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.62□□□□□ -1.99
PTP4A1Q93096 Y_RNA.672-201ENST00000516289 104 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 MIR892C-201ENST00000516410 77 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 ACA59.2-201ENST00000517061 156 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 AP003467.2-201ENST00000520175 319 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC106038.2-201ENST00000520706 568 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 ADI1P3-201ENST00000549509 470 ntBASIC2.62□□□□□ -1.99
PTP4A1Q93096 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms