Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKAP2Q8WWK9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CKAP2Q8WWK9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
CKAP2Q8WWK9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 CR848007.1-201ENST00000442354 1699 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 FGF7P2-201ENST00000332473 296 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RNU6-778P-201ENST00000363269 103 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 U8.3-201ENST00000363321 132 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RNU1-73P-201ENST00000383971 164 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RNU6-195P-201ENST00000411352 109 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC092809.3-201ENST00000415453 231 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC009518.2-201ENST00000418056 731 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC104850.1-201ENST00000435940 476 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL022238.1-201ENST00000442557 355 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 FABP5P13-201ENST00000452144 328 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL033528.1-201ENST00000453780 140 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC027673.1-201ENST00000456245 405 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 snoU109.1-201ENST00000459339 135 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RPL27AP5-201ENST00000469428 449 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RAP1BP2-201ENST00000478270 544 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 MRPS36P2-201ENST00000512569 299 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC008885.1-201ENST00000514930 301 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 RNU6-677P-201ENST00000516914 101 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL590229.1-201ENST00000603497 542 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AL160281.1-201ENST00000605307 311 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC022893.3-201ENST00000607665 437 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 DUSP12P1-201ENST00000612874 516 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 AC026422.1-201ENST00000623961 452 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 Z99571.1-201ENST00000636677 394 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 MIR3974-201ENST00000637126 96 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 U2.21-201ENST00000637295 81 ntBASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP2Q8WWK9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL137003.2-201ENST00000606924 2538 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 RNY1P12-201ENST00000364251 105 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 SNORA71.1-201ENST00000364523 117 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 SNORA20.2-201ENST00000383922 131 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 RNU6-658P-201ENST00000384606 106 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC090960.1-201ENST00000421072 306 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 BPY2DP-201ENST00000422208 265 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 ISCA1P6-201ENST00000427740 390 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL671855.1-201ENST00000446875 1203 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 RNA5SP269-201ENST00000459032 137 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 RPL31P41-201ENST00000477967 372 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC126182.1-201ENST00000478134 357 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC007182.2-201ENST00000489251 402 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC006445.1-201ENST00000491925 405 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC010486.3-201ENST00000511602 785 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC091965.2-201ENST00000512324 613 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AP002453.2-201ENST00000533503 320 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL451064.1-201ENST00000607718 471 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AC013562.2-201ENST00000611632 603 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL162274.2-201ENST00000614406 332 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AL512643.1-201ENST00000635735 524 ntBASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP2Q8WWK9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.71□□□□□ -1.98
CKAP2Q8WWK9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CKAP2Q8WWK9 AC073343.1-201ENST00000328239 651 ntBASIC2.71□□□□□ -1.98
CKAP2Q8WWK9 RNU6-190P-201ENST00000384154 102 ntBASIC2.71□□□□□ -1.98
CKAP2Q8WWK9 SNORA48.5-201ENST00000391143 135 ntBASIC2.71□□□□□ -1.98
CKAP2Q8WWK9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms