Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 ZNF886P-201ENST00000450781 723 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 MRPS17P3-201ENST00000465453 385 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC023141.11-201ENST00000508864 202 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC025755.1-201ENST00000521306 278 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 CYCSP26-201ENST00000534107 320 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 OR6C7P-201ENST00000547875 934 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 CYCSP2-201ENST00000558168 301 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AGGF1P5-201ENST00000567900 919 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC005951.2-201ENST00000576282 495 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC092574.1-201ENST00000609771 420 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC009090.3-201ENST00000616553 565 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC098657.3-201ENST00000620434 263 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AC091953.2-201ENST00000623979 160 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AL159972.1-201ENST00000625150 448 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 KPNA2P1-201ENST00000458289 1591 ntBASIC1.71□□□□□ -2.14
LMX1AQ8TE12 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.71□□□□□ -2.14
LMX1AQ8TE12 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 Y_RNA.4-201ENST00000362333 112 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 RNU5E-10P-201ENST00000363506 118 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 Y_RNA.238-201ENST00000364441 102 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 RNU6-1078P-201ENST00000364522 103 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 Y_RNA.472-201ENST00000384322 102 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 RNU6-220P-201ENST00000390919 107 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 RNA5SP247-201ENST00000411181 105 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC096649.2-201ENST00000416186 393 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AL953862.1-201ENST00000423016 168 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 NANOGP2-201ENST00000435391 727 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 COX7BP2-201ENST00000437976 242 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 OR10R1P-201ENST00000441524 1141 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 OSTCP8-201ENST00000445117 448 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AL358794.1-201ENST00000445689 381 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 DDX3P2-201ENST00000446138 111 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 MTND1P31-201ENST00000449206 961 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC104982.1-201ENST00000478775 574 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC021382.1-201ENST00000483523 359 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC117532.1-201ENST00000514638 323 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 HMGN2P15-201ENST00000585707 270 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 VN1R80P-201ENST00000597126 338 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AL109809.4-201ENST00000603520 2185 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC021749.1-201ENST00000604322 607 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC107214.2-201ENST00000608204 634 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 FTX_3.1-201ENST00000610451 147 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC231657.1-201ENST00000624313 397 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 AC106858.1-201ENST00000637497 429 ntBASIC1.7□□□□□ -2.14
LMX1AQ8TE12 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.7□□□□□ -2.14
LMX1AQ8TE12 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AL138713.1-201ENST00000624026 2130 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 HSPE1P11-201ENST00000339579 310 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 MIR378A-201ENST00000362177 66 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 SNORA23-201ENST00000365128 182 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RNU6-1207P-201ENST00000384343 107 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RNU6-750P-201ENST00000390946 107 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RPL23AP29-201ENST00000397284 453 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 MIR888-201ENST00000401186 77 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 ERHP2-201ENST00000402323 299 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 FGF7P8-201ENST00000402994 292 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 SNORD23.1-201ENST00000408212 104 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RNU2-33P-201ENST00000410344 192 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RNU2-40P-201ENST00000410833 196 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RNU6-1328P-201ENST00000410938 106 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 HMGB1P9-201ENST00000429856 646 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms