Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL390862.1-201ENST00000635467 1469 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 U8.2-201ENST00000363156 134 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 Y_RNA.578-201ENST00000390903 88 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 HMGN2P39-201ENST00000398005 273 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AL590084.1-201ENST00000407885 387 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 Z98742.3-201ENST00000418637 326 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 ELOCP14-201ENST00000428070 331 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 ELOCP7-201ENST00000439968 331 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 RPL9P6-201ENST00000492764 598 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 RPL22P13-201ENST00000493291 347 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 CKS1BP2-201ENST00000497342 240 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC091965.2-201ENST00000512324 613 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 RNU6-927P-201ENST00000516199 100 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 OR5AL2P-201ENST00000532185 920 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC004987.4-201ENST00000603383 338 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AL355297.2-201ENST00000604792 129 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 AC231657.1-201ENST00000624313 397 ntBASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLHC1Q8NHS4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 DDX43P2-201ENST00000604753 1354 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 RNA5SP240-201ENST00000365355 128 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 RNU6-224P-201ENST00000384055 107 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 USP9YP26-201ENST00000421008 661 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 MTCO2P25-201ENST00000447065 681 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AL353705.4-201ENST00000449661 238 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 snoU109.1-201ENST00000459339 135 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC113347.3-201ENST00000509113 148 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC110760.3-202ENST00000515177 371 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC112198.4-201ENST00000515450 351 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 RNY4P37-201ENST00000516225 96 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC021739.1-201ENST00000559631 174 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 LINC00933-203ENST00000559812 219 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC012435.1-202ENST00000568772 240 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 MTCYBP22-201ENST00000603788 447 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC103710.1-201ENST00000610003 901 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 MIR5739-201ENST00000619803 80 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC126544.2-201ENST00000625174 749 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CLHC1Q8NHS4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 Y_RNA.245-201ENST00000364493 95 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 RNU6-1257P-201ENST00000384625 110 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AL353729.1-201ENST00000425044 720 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AL356320.1-201ENST00000429616 163 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 NANOGP2-201ENST00000435391 727 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 MTND1P28-201ENST00000435623 950 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AL161651.1-201ENST00000440882 223 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC096638.1-201ENST00000444678 216 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AL513124.1-201ENST00000450410 614 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 ANXA2P1-201ENST00000505539 926 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 FAM92A1P1-201ENST00000528023 890 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 MIR1273D-201ENST00000577266 86 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 MIR3945-201ENST00000581853 98 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC091152.3-201ENST00000604227 325 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 AC009233.1-201ENST00000616477 371 ntBASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLHC1Q8NHS4 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms