Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 RNU6-1062P-201ENST00000383908 107 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.515-201ENST00000384535 112 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AL592148.1-201ENST00000413568 445 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 EI24P1-201ENST00000416584 867 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC092423.1-201ENST00000430165 186 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 LINC01399-202ENST00000458450 244 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC133134.1-201ENST00000466800 359 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 RN7SL459P-201ENST00000481078 302 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.673-201ENST00000516306 88 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 RNU6-911P-201ENST00000516523 104 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 RNU6-570P-201ENST00000517051 105 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC084851.1-201ENST00000529105 249 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AP006289.1-201ENST00000538089 277 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 MIR4284-201ENST00000578924 81 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC091979.2-201ENST00000607514 214 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 MIR6891-201ENST00000618788 93 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AP005019.3-201ENST00000620418 560 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 SDR42E1P4-201ENST00000620894 481 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AL023881.1-201ENST00000621088 301 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AP001273.1-201ENST00000624493 3152 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 Z73965.1-201ENST00000623412 2297 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MTND5P6-201ENST00000422338 1798 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC079741.1-201ENST00000321498 212 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RPL9P7-201ENST00000330965 580 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RNU6-595P-201ENST00000363944 107 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RN7SKP227-201ENST00000364445 330 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RNU6-398P-201ENST00000384143 109 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 EIF4EP2-201ENST00000422816 654 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC091390.3-201ENST00000426478 338 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MYL8P-204ENST00000431574 518 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AL513043.1-201ENST00000439124 535 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RPL9P9-202ENST00000466501 579 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AL049874.1-201ENST00000489560 388 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RNU6-143P-201ENST00000516942 93 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC034114.1-201ENST00000520293 285 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AP003733.2-201ENST00000529409 171 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC136624.4-201ENST00000573044 370 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC009314.1-201ENST00000603871 304 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AL360181.4-201ENST00000621752 134 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MIR6715B-201ENST00000637172 77 ntBASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NUP43Q8NFH3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 OR4G2P-202ENST00000641004 1759 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC000123.3-201ENST00000624029 4975 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-37P-201ENST00000362692 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.117-201ENST00000363294 101 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-11P-201ENST00000364234 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-7-201ENST00000364784 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-8-201ENST00000365467 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-25P-201ENST00000383873 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-1-201ENST00000383898 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-48P-201ENST00000384161 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-36P-201ENST00000384172 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-4P-201ENST00000384205 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-5P-201ENST00000384238 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-611P-201ENST00000384276 104 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.471-201ENST00000384312 102 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms