Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RBBP4P6-201ENST00000508098 202 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 RN7SKP24-201ENST00000515888 284 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC022790.1-201ENST00000522872 204 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AP000763.2-201ENST00000540641 163 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC135001.1-201ENST00000544546 283 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC090115.3-201ENST00000553218 849 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AL355836.1-201ENST00000555951 870 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 AP000654.2-201ENST00000605633 586 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A3Q8N4M1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 Y_RNA.28-201ENST00000362554 111 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-1105P-201ENST00000384774 107 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RNU4-65P-201ENST00000410473 140 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RPL21P24-201ENST00000413752 448 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RPL31P12-201ENST00000422587 358 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RAC1P6-201ENST00000423911 575 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC005326.1-201ENST00000429197 123 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MTCO3P10-201ENST00000455912 772 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AP001486.1-201ENST00000463339 476 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AL049873.1-201ENST00000480540 376 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RN7SL432P-201ENST00000484057 298 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MTCYBP40-201ENST00000509390 1135 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 PTP4A1P4-201ENST00000512479 322 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 SMURF2P1-201ENST00000514992 481 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-189P-201ENST00000516120 101 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RNU1-103P-201ENST00000516502 125 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AF038458.1-201ENST00000588406 262 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AL669831.4-202ENST00000590817 238 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 XIAPP1-201ENST00000603162 600 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC006254.3-201ENST00000603353 884 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 YPEL5P2-201ENST00000605553 359 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 AC004696.1-201ENST00000614345 607 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 SNHG22-203ENST00000617833 660 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC44A3Q8N4M1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 ZNF33CP-201ENST00000432492 2030 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-946P-201ENST00000383878 107 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 Y_RNA.459-201ENST00000384251 102 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-463P-201ENST00000384340 107 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 BX682237.1-201ENST00000415016 335 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 UBE2FP1-201ENST00000416536 447 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 ATG3P1-201ENST00000419507 911 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AC005300.1-201ENST00000428401 373 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 IPO7P1-201ENST00000442031 636 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MTCO3P45-201ENST00000443036 613 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 FTH1P25-201ENST00000447665 469 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MTND5P22-201ENST00000458380 195 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 SCARNA18-201ENST00000459004 134 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AC008481.1-201ENST00000463278 396 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms