Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-884P-201ENST00000363889 107 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-715P-201ENST00000365204 103 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-1227P-201ENST00000383981 107 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-434P-201ENST00000384376 107 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-393P-201ENST00000384475 107 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR591-201ENST00000385290 95 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AL592114.1-201ENST00000403842 483 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR1302-11-201ENST00000408051 138 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR1302-9-201ENST00000408365 138 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR1302-10-201ENST00000408734 138 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AL354751.2-201ENST00000415471 210 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RPL21P90-201ENST00000415692 466 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC007390.1-201ENST00000415722 356 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC099548.1-201ENST00000421443 426 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC007560.1-201ENST00000426912 237 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC004975.1-201ENST00000428733 208 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 NIPA2P5-201ENST00000452282 464 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RNU7-180P-201ENST00000459240 63 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC084198.1-201ENST00000477747 402 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AL049830.2-201ENST00000480072 201 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RPL21P99-201ENST00000480369 423 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 RPS29P25-201ENST00000481709 171 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 HMGN1P13-201ENST00000505795 138 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AP003072.1-201ENST00000531740 145 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 AC010525.2-201ENST00000590920 195 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR1302-2-201ENST00000607096 138 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 Z82243.1-201ENST00000609432 473 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 MIR6875-201ENST00000617506 72 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 U7.8-201ENST00000619968 63 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.67□□□□□ -1.82
KRT78Q8N1N4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT78Q8N1N4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 RNU6-451P-201ENST00000362921 107 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.279-201ENST00000364763 95 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 U1.1-201ENST00000384101 164 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.460-201ENST00000384255 102 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 SNORD70.1-201ENST00000391007 85 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 MIR888-201ENST00000401186 77 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 ARL5AP1-201ENST00000418991 388 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL158071.1-201ENST00000430315 461 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC005534.2-201ENST00000431047 433 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 RPL26P9-201ENST00000457466 433 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 HMGN2P13-201ENST00000476476 274 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC139453.3-201ENST00000493276 369 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 RN7SL323P-201ENST00000494712 295 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC091885.1-201ENST00000506658 268 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 HPRT1P3-201ENST00000539521 576 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 BRDTP1-201ENST00000605735 677 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL050343.2-201ENST00000607338 280 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 U2.17-201ENST00000611454 95 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
KRT78Q8N1N4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT78Q8N1N4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms