Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC099677.1-201ENST00000420575 175 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 COX6B1P7-201ENST00000430845 235 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 RPL26P26-201ENST00000480251 434 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 SCARNA22-201ENST00000503991 125 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 SNORA40.9-201ENST00000515895 93 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 RNA5SP230-201ENST00000517039 122 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 AC116158.1-201ENST00000560231 2129 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 MIR4715-201ENST00000584117 79 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC008758.3-201ENST00000507003 1829 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC112198.2-201ENST00000426589 6996 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 RNU6-961P-201ENST00000363893 105 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 RNU1-130P-201ENST00000363930 160 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 RNVU1-3-201ENST00000364313 161 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 SNORA70.2-201ENST00000364506 135 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 RNU6-1180P-201ENST00000364935 107 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 SNORA70F-201ENST00000384142 135 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 U3.22-201ENST00000391120 215 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 U3.30-201ENST00000391308 210 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL096701.2-201ENST00000416920 238 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL158823.1-201ENST00000418441 478 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL450023.3-201ENST00000440592 271 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL031737.1-201ENST00000450125 223 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL356981.1-201ENST00000454879 684 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 snoU13.30-201ENST00000458951 104 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AK3P2-201ENST00000507976 429 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 RNU6-191P-201ENST00000516295 94 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC092470.1-201ENST00000546187 132 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 HMGB1P14-201ENST00000557424 591 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 MIR4660-201ENST00000583549 74 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AL034351.1-201ENST00000605288 668 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 AC020633.1-201ENST00000468439 2247 ntBASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NPAS3Q8IXF0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 RNU6-968P-201ENST00000384076 107 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 RNU6-376P-201ENST00000384731 106 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AL357515.1-201ENST00000402967 542 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 LAP3P1-201ENST00000403648 294 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 SNORD56-201ENST00000413522 71 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AIMP1P2-201ENST00000425294 312 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 Y_RNA.651-201ENST00000459380 103 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 SNORD33.1-201ENST00000516213 88 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AC136624.4-201ENST00000573044 370 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 U7.2-201ENST00000607576 63 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 AL355816.1-201ENST00000607951 118 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 FAM27B-201ENST00000610601 213 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 MIR3914-2-201ENST00000637339 95 ntBASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.08□□□□□ -1.6
NPAS3Q8IXF0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms