Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC098591.2-201ENST00000510152 315 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC126177.3-201ENST00000551839 688 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 MIR2682-201ENST00000580305 110 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 MIR4795-201ENST00000584182 89 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC007742.2-201ENST00000618226 398 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 MIR4275-201ENST00000636486 87 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 MTND1P37-201ENST00000636562 264 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL122016.1-201ENST00000403365 367 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-26P-201ENST00000410270 107 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 NCOR1P3-201ENST00000420479 303 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL353705.1-201ENST00000433468 480 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC004866.2-201ENST00000438285 481 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-329P-201ENST00000459618 107 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 RPL7P47-201ENST00000497299 556 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.675-201ENST00000516389 149 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 BTF3P12-201ENST00000519620 469 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC010928.3-201ENST00000587712 541 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 HMGN2P28-201ENST00000606102 262 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AL353748.2-201ENST00000622148 471 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AC110801.1-201ENST00000623590 212 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 AP003400.5-201ENST00000624827 617 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 U6.114-201ENST00000636407 96 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.06□□□□□ -1.76
UBE3BQ7Z3V4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 MIR30E-201ENST00000362104 92 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-79P-201ENST00000362764 141 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-66P-201ENST00000365199 138 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SMIM11P1-201ENST00000369586 178 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SNORA48.5-201ENST00000391143 135 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 AC110754.1-201ENST00000399740 601 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SSXP9-201ENST00000417503 292 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 ARL5AP1-201ENST00000418991 388 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SNRPFP3-201ENST00000457792 225 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 FAM206BP-201ENST00000510179 541 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 SNORA19.2-201ENST00000516013 114 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 MIR4742-201ENST00000581069 85 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 AC135507.2-201ENST00000612443 309 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 TPTEP1-208ENST00000636884 213 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 API5P2-201ENST00000397055 1498 ntBASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE3BQ7Z3V4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AL353743.1-202ENST00000431724 1695 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 SNORA32.2-201ENST00000384049 122 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms