Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU1-35P-201ENST00000362782 153 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.135-201ENST00000363439 95 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.257-201ENST00000364596 102 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC117470.1-201ENST00000381974 330 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU6-1040P-201ENST00000383974 107 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU6-1029P-201ENST00000384109 107 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.473-201ENST00000384333 102 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.496-201ENST00000384444 101 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 MIR454-201ENST00000390180 115 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 SNORA48.5-201ENST00000391143 135 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU6-603P-201ENST00000411403 107 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 FTH1P6-201ENST00000430768 320 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RPS20P1-201ENST00000434853 354 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 GSTA11P-201ENST00000452866 669 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 MTCO3P2-201ENST00000457365 171 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNU6-976P-201ENST00000516086 111 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNA5SP454-201ENST00000517231 127 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AP000763.2-201ENST00000540641 163 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 Z82243.1-201ENST00000609432 473 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC006157.1-201ENST00000611750 366 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC012409.4-201ENST00000612923 249 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AL159972.1-201ENST00000625150 448 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 AC007529.1-201ENST00000418574 2178 ntBASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYCE2Q6PIF2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RNY3P13-201ENST00000365542 102 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 SNORA51.6-201ENST00000384151 125 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RNU6-601P-201ENST00000384540 107 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 SNORD17-201ENST00000390930 237 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC080125.1-201ENST00000414888 684 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RPL36P19-201ENST00000430744 301 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 TIMM9P1-201ENST00000436122 256 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RPL12P46-201ENST00000436610 195 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 PCNPP5-201ENST00000452246 481 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 PABPC1P3-201ENST00000469174 459 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RPL23AP94-201ENST00000512518 302 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.661-201ENST00000516003 99 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 RNU6-120P-201ENST00000516077 103 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC068446.3-201ENST00000555285 382 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 MTCO3P23-201ENST00000561363 289 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 MIR4775-201ENST00000581168 75 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC060771.1-201ENST00000582031 164 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 MIR5690-201ENST00000583739 73 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC104695.3-201ENST00000604052 296 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC103710.2-201ENST00000609912 942 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AC116447.1-201ENST00000613153 453 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 MIR6852-201ENST00000621699 66 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AL669831.3-213ENST00000636676 183 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYCE2Q6PIF2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms