Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RPL7P2-201ENST00000427639 268 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 HMGB1P31-201ENST00000437242 427 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC006011.1-201ENST00000442758 349 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RANP8-201ENST00000444720 713 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RPS29P12-201ENST00000460178 152 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC128713.1-201ENST00000471495 306 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC093663.1-201ENST00000497190 394 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 MTCYBP18-201ENST00000501056 747 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC099522.1-202ENST00000514718 367 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-572P-201ENST00000516724 80 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC007224.1-201ENST00000564410 144 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC002064.3-201ENST00000623448 346 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC099654.7-201ENST00000635788 2127 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 ZNF826P-207ENST00000622273 1910 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 Z98749.2-208ENST00000381646 500 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-877P-201ENST00000383868 107 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-166P-201ENST00000384371 107 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 MIR767-201ENST00000390228 109 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNA5SP354-201ENST00000391247 136 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL592148.1-201ENST00000413568 445 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RPL21P90-201ENST00000415692 466 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL353678.1-201ENST00000422735 741 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC073063.1-201ENST00000434352 607 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL358232.1-201ENST00000448030 501 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 HMGN2P10-201ENST00000448085 265 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 HMGN2P26-201ENST00000463169 339 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC004801.2-202ENST00000463559 283 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RPL21P13-201ENST00000488305 481 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU1-86P-201ENST00000516108 154 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU1-107P-201ENST00000516617 154 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 SNORA31.19-201ENST00000517079 126 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 BNIP3P6-201ENST00000549284 499 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC078814.3-201ENST00000553036 491 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC025884.1-201ENST00000556034 378 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AL133241.1-201ENST00000556832 487 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 CYCSP39-201ENST00000565821 309 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC025627.2-201ENST00000576220 160 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RBM11P1-201ENST00000604951 799 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-89P-201ENST00000606519 100 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 U6.99-201ENST00000637524 83 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 AC092435.3-201ENST00000565538 3654 ntBASIC3.71□□□□□ -1.82
PPP4R4Q6NUP7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-384P-201ENST00000364900 104 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-45P-201ENST00000384471 107 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AL592114.1-201ENST00000403842 483 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AL391417.1-201ENST00000404100 426 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AL445189.1-201ENST00000405722 338 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 MIR1289-1-201ENST00000408836 144 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 RNU2-3P-201ENST00000410144 191 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 RNA5SP317-201ENST00000410176 116 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 RNA5SP311-201ENST00000411290 116 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 AL691449.1-201ENST00000426570 421 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 NUTF2P7-201ENST00000453086 375 ntBASIC3.7□□□□□ -1.82
PPP4R4Q6NUP7 MTND3P25-201ENST00000509243 135 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 297.5 ms