Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ZNF299P-201ENST00000406845 1804 ntBASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC083843.3-201ENST00000623679 2186 ntBASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1Q5Y7H0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 OR56A5-201ENST00000340110 738 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.14-201ENST00000362415 103 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNA5SP447-201ENST00000363749 119 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNU6-708P-201ENST00000384217 107 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR124-3-201ENST00000384866 87 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 Z85995.1-201ENST00000415547 335 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL159987.2-201ENST00000432754 307 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 FCF1P4-201ENST00000448326 183 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RN7SL41P-201ENST00000476144 297 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPL23AP45-201ENST00000476406 468 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RN7SL459P-201ENST00000481078 302 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC093840.1-201ENST00000511599 336 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 RAB9BP1-201ENST00000519581 626 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC025755.1-201ENST00000521306 278 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 MED28P6-201ENST00000558776 231 ntBASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQA1Q5Y7H0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.60-201ENST00000362831 98 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNU6-595P-201ENST00000363944 107 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNU4-50P-201ENST00000364361 141 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 SNORD14B-201ENST00000364533 90 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.526-201ENST00000384572 110 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 SNORD96B-201ENST00000386148 79 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 SNORA69.1-201ENST00000390904 137 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 SAR1AP2-201ENST00000392696 594 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.623-201ENST00000411128 95 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 TMSB10P2-201ENST00000416049 131 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC007098.1-201ENST00000420122 367 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC007919.1-201ENST00000429380 217 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 SUMO1P2-201ENST00000452524 304 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC139453.3-201ENST00000493276 369 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNU6-570P-201ENST00000517051 105 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPS29P30-201ENST00000600975 111 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC006557.5-201ENST00000603126 811 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC096772.1-201ENST00000609146 564 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC004852.3-201ENST00000614131 326 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC140113.4-201ENST00000622087 222 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC007546.2-201ENST00000623996 360 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 MTND5P9-201ENST00000503854 1755 ntBASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1Q5Y7H0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms