Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 RPL39P29-201ENST00000447779 157 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AC109927.2-201ENST00000506416 303 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AC243960.4-201ENST00000600532 288 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AC096720.1-201ENST00000604441 183 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AC012676.2-201ENST00000619258 186 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 RNY4P3-201ENST00000365254 95 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 OR9R1P-201ENST00000412200 877 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 Z95118.1-201ENST00000421372 247 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 EIF4EP4-201ENST00000424916 578 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 SNRPEP7-201ENST00000438350 220 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC118282.2-201ENST00000508739 374 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC108120.2-201ENST00000512973 294 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 MIR676-201ENST00000390702 67 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 RPL23AP3-201ENST00000453844 468 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 MIR4422-201ENST00000581938 83 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 SNORA1.3-201ENST00000384676 136 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AL606495.1-201ENST00000422100 813 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 AP005639.2-201ENST00000527592 928 ntBASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.33□□□□□ -2.36
VPS13DQ5THJ4 MTCO1P56-201ENST00000401674 224 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 C1DP3-201ENST00000455013 423 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 HMGN2P9-201ENST00000476875 229 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AP005902.1-201ENST00000521358 186 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 NIFKP6-201ENST00000598115 845 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AP001485.1-201ENST00000604799 199 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 MIR6076-201ENST00000617521 113 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 snoU109.1-201ENST00000459339 135 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 CYCSP2-201ENST00000558168 301 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC008751.2-201ENST00000597885 980 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC135507.1-201ENST00000607214 561 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC087588.2-201ENST00000617667 426 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 MIR92A2-201ENST00000385299 75 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 FTH1P15-201ENST00000406984 280 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 RNU6-272P-201ENST00000411028 104 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 RPL21P24-201ENST00000413752 448 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC004383.1-201ENST00000438135 289 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 ANKRD26P4-201ENST00000455755 950 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 RPS27P22-201ENST00000478056 241 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC104108.1-201ENST00000509930 412 ntBASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13DQ5THJ4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC092393.1-201ENST00000439625 742 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL590282.1-201ENST00000610379 1136 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 ZNF702P-202ENST00000434269 1966 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 SNORD95.1-201ENST00000364099 68 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL157398.1-201ENST00000452981 186 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC136932.1-201ENST00000574771 208 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AP001269.3-201ENST00000588718 329 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 MIR1912-201ENST00000410389 80 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 VN1R42P-201ENST00000424651 344 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC022022.1-201ENST00000430304 178 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 RNU7-193P-201ENST00000516723 65 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 SCARNA1-201ENST00000517138 166 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 EIF4A1P12-201ENST00000551910 141 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL138880.2-201ENST00000616214 239 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 RNU6-733P-201ENST00000410759 104 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC021146.2-201ENST00000504736 556 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC087272.1-201ENST00000523624 533 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 AC090132.2-201ENST00000615881 347 ntBASIC0.31□□□□□ -2.36
VPS13DQ5THJ4 RPL37P10-201ENST00000412884 288 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 RPL23AP35-201ENST00000451906 501 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 MIR409-201ENST00000362237 79 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms