Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 MIR372-201ENST00000362225 67 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.275-201ENST00000364726 110 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 SNORA12.2-201ENST00000391040 156 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 SNORD78.2-201ENST00000391076 69 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 RPS15AP40-201ENST00000419621 391 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 RN7SL600P-201ENST00000581811 299 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 AC006133.1-201ENST00000617106 264 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 AC140479.6-201ENST00000633535 357 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 DHX9P1-201ENST00000436565 3076 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.82-201ENST00000363000 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.92-201ENST00000363043 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.235-201ENST00000364412 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.272-201ENST00000364696 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.306-201ENST00000365015 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.312-201ENST00000365089 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.322-201ENST00000365151 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RNA5SP283-201ENST00000365604 119 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.400-201ENST00000383963 111 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RPL31P2-201ENST00000413849 377 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AC012671.1-201ENST00000451912 203 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 snoU109.4-201ENST00000458953 143 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.650-201ENST00000459002 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 U8.21-201ENST00000459536 136 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AL132838.2-201ENST00000492041 314 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 SNORA31.3-201ENST00000516029 96 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RNU6-914P-201ENST00000516749 109 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.777-201ENST00000516982 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AC104581.2-201ENST00000572227 430 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RPL23AP87-202ENST00000573039 466 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.771-201ENST00000598668 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RPL7P50-201ENST00000600588 727 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 BRDTP1-201ENST00000605735 677 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 MIR6867-201ENST00000610636 67 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.789-201ENST00000622480 102 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 AC112484.5-201ENST00000624189 228 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
RC3H1Q5TC82 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RC3H1Q5TC82 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 SAGE4P-201ENST00000442271 3381 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.405-201ENST00000383979 100 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.451-201ENST00000384200 100 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.524-201ENST00000384564 100 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.561-201ENST00000384694 100 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.597-201ENST00000410463 100 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 RNU6-628P-201ENST00000410675 107 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 RPL30P3-201ENST00000424262 333 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 MTCO1P39-201ENST00000426148 480 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 HMGB1P25-201ENST00000468402 607 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 RPL30P1-201ENST00000488676 339 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 RPS27AP13-201ENST00000498403 237 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 FTH1P24-201ENST00000503502 462 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 RNA5SP230-201ENST00000517039 122 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 BPIFA4P-203ENST00000603168 689 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 AC011476.5-201ENST00000615594 130 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 MIR6130-201ENST00000619419 109 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms