Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RPL7P18-201ENST00000478965 734 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC109927.2-201ENST00000506416 303 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 RNU1-104P-201ENST00000517280 175 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AP005597.4-201ENST00000526762 229 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 BNIP3P16-201ENST00000589779 534 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC241377.1-201ENST00000619797 406 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 RNA5SP393-201ENST00000363423 117 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 Y_RNA.186-201ENST00000363899 92 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AL358794.1-201ENST00000445689 381 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 snoU109.2-201ENST00000459316 135 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AP000926.1-201ENST00000479573 241 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 RNU6-732P-201ENST00000516033 103 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC107918.3-201ENST00000533272 382 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC087897.1-201ENST00000550134 156 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 Y_RNA.231-201ENST00000364358 102 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC004022.2-201ENST00000413824 193 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 RNU6-1334P-201ENST00000516032 105 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC091932.3-201ENST00000624223 323 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 MRPL35P1-201ENST00000404272 572 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RNU6-575P-201ENST00000411326 105 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC021646.1-201ENST00000605469 484 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC091912.2-201ENST00000624798 167 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 SNORA25.3-201ENST00000363205 127 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 CCNG1P1-201ENST00000406783 885 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC092648.1-201ENST00000425870 423 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 SUMO2P2-201ENST00000456482 255 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AL118496.1-201ENST00000440201 1812 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 MIR26B-201ENST00000362251 77 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RNU6-1216P-201ENST00000362590 107 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RNU6-339P-201ENST00000384310 107 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RNU2-37P-201ENST00000410695 177 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RPS3AP36-201ENST00000398190 775 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC114811.1-201ENST00000507207 168 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 CASP1P1-201ENST00000526345 212 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC009452.1-201ENST00000640823 606 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.36□□□□□ -2.35
UBR4Q5T4S7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC022431.1-201ENST00000450941 438 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 CYCTP-201ENST00000504253 315 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AP003049.1-201ENST00000529418 457 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 uc_338.9-201ENST00000617424 182 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AL031601.2-202ENST00000622650 282 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AP003476.1-201ENST00000623984 516 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC092745.2-202ENST00000411880 369 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AL500527.1-201ENST00000448532 255 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 RPL37P25-201ENST00000507308 276 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 RPS27AP18-201ENST00000515536 459 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC239860.2-201ENST00000525886 270 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC022880.1-201ENST00000534017 973 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC023050.3-201ENST00000541142 333 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 uc_338.6-201ENST00000613544 171 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC068620.4-201ENST00000636730 1182 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 RLIMP2-201ENST00000427891 1563 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC022493.1-201ENST00000492984 337 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC114322.1-201ENST00000506771 926 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 SDAD1P2-201ENST00000441308 2028 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC010099.1-201ENST00000455434 375 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 PCNAP1-201ENST00000505363 709 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AL133393.1-201ENST00000603277 287 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC048347.1-201ENST00000624621 427 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 AC087359.1-201ENST00000508335 1740 ntBASIC0.35□□□□□ -2.35
UBR4Q5T4S7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 RNU2-12P-201ENST00000517216 168 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AP001005.3-201ENST00000622049 129 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 RNU6-674P-201ENST00000363831 107 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 MTCO1P56-201ENST00000401674 224 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.34□□□□□ -2.35
UBR4Q5T4S7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms