Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC125611.2-201ENST00000551907 647 ntBASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 MIR3662-201ENST00000637030 95 ntBASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 CASC19-280ENST00000642102 1351 ntBASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC39AQ5SRH9 AC093010.3-201ENST00000570269 15214 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AL035425.3-201ENST00000564206 4996 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 RNU6-908P-201ENST00000410160 94 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 MRPL50P2-201ENST00000416821 482 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 COTL1P1-201ENST00000422309 375 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 RPS20P5-201ENST00000434808 360 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC005094.1-201ENST00000440420 368 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 RPL37P4-201ENST00000448908 268 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC010285.1-201ENST00000470580 392 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC083798.1-201ENST00000472671 131 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 RPL36AP51-201ENST00000487216 318 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC103783.1-201ENST00000520506 373 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC245166.1-201ENST00000521012 253 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC011979.2-201ENST00000527568 352 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC123904.3-201ENST00000547218 814 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 MIR4293-201ENST00000584305 78 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AC105224.1-201ENST00000587055 421 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 AL162413.1-201ENST00000603198 110 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 DUXAP9-208ENST00000622815 614 ntBASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TTC39AQ5SRH9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC009487.2-201ENST00000420969 6821 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 SNORA69-201ENST00000383895 132 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RNU6-754P-201ENST00000391166 107 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AL139132.1-201ENST00000431587 344 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RPL35AP22-201ENST00000436855 335 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC079781.2-201ENST00000446424 169 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC006512.1-201ENST00000468816 291 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RPS29P25-201ENST00000481709 171 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC233702.1-201ENST00000482905 502 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC083906.5-201ENST00000503722 328 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC098799.2-201ENST00000509466 868 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC026801.2-201ENST00000515352 425 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RNU6-358P-201ENST00000516564 75 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 RNU6-835P-201ENST00000516974 104 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 SNORA31.20-201ENST00000517111 133 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC128657.1-201ENST00000549459 145 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 HIF1AP1-201ENST00000553642 175 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 EIF4BP1-201ENST00000554881 351 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 LARP7P3-201ENST00000579888 337 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC008752.3-201ENST00000588113 712 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC099778.2-201ENST00000610904 211 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC093838.1-201ENST00000613014 469 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 AC092794.2-201ENST00000620933 563 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 YWHAEP7-203ENST00000622054 312 ntBASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 FER-210ENST00000628534 558 ntTSL 5 BASIC3.59□□□□□ -1.83
TTC39AQ5SRH9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.84
TTC39AQ5SRH9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
TTC39AQ5SRH9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.59□□□□□ -1.84
TTC39AQ5SRH9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 SNORA72.1-201ENST00000363485 129 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 MIR558-201ENST00000384920 94 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 MT-TL1-201ENST00000386347 75 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 AL109755.1-201ENST00000401791 649 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 FGF7P8-201ENST00000402994 292 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 RPS3AP24-201ENST00000407896 734 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 AC138393.2-201ENST00000414742 246 ntBASIC3.58□□□□□ -1.84
TTC39AQ5SRH9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms