Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 OR4G2P-202ENST00000641004 1759 ntBASIC2.68□□□□□ -1.98
SIX1Q15475 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SIX1Q15475 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SIX1Q15475 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SIX1Q15475 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX1Q15475 CR848007.1-201ENST00000442354 1699 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC002546.1-201ENST00000588041 2504 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SIX1Q15475 HSPE1P11-201ENST00000339579 310 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 MIR493-201ENST00000385254 89 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RNU2-36P-201ENST00000410361 191 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX1Q15475 PIGFP2-201ENST00000421400 651 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX1Q15475 RPL7L1P10-201ENST00000427790 463 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC236972.1-201ENST00000433225 199 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC020550.1-201ENST00000447385 163 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX1Q15475 SNORD97-201ENST00000459187 142 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RPL21P8-201ENST00000465083 535 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC008571.1-201ENST00000467232 300 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC004924.1-201ENST00000480160 781 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC105252.1-201ENST00000503089 286 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC091133.4-201ENST00000511142 308 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RNU1-61P-201ENST00000516107 151 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RNU6-390P-201ENST00000516259 103 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RNU2-10P-201ENST00000516375 211 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 RNU6-1220P-201ENST00000517126 108 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC243972.3-201ENST00000539655 198 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC087883.1-201ENST00000551882 391 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AL391840.1-201ENST00000571144 367 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX1Q15475 AC068790.2-201ENST00000602601 557 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 MIR98-201ENST00000606724 119 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AL161734.1-201ENST00000609720 557 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC090132.2-201ENST00000615881 347 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 AC136475.10-201ENST00000620253 385 ntBASIC2.67□□□□□ -1.98
SIX1Q15475 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX1Q15475 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX1Q15475 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX1Q15475 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX1Q15475 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX1Q15475 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SIX1Q15475 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX1Q15475 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SIX1Q15475 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIX1Q15475 SNORD56.2-201ENST00000363242 71 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 RNU6-169P-201ENST00000365336 107 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX1Q15475 RNU5A-6P-201ENST00000384136 116 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 Y_RNA.517-201ENST00000384551 106 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 MIR9-1-201ENST00000385198 89 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIX1Q15475 SAR1AP2-201ENST00000392696 594 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AL360182.1-201ENST00000397433 468 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 RN7SKP140-201ENST00000411196 284 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 RPLP0P7-201ENST00000416050 667 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX1Q15475 AL451054.2-201ENST00000420896 202 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 UBE2D3P2-201ENST00000424409 445 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC133104.1-201ENST00000429100 218 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 AL358934.1-201ENST00000432346 324 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 MTATP6P30-201ENST00000443540 664 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 RPS20P20-201ENST00000460498 340 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 AP003072.2-201ENST00000527756 676 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX1Q15475 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX1Q15475 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
SIX1Q15475 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX1Q15475 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.66□□□□□ -1.98
SIX1Q15475 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AL133393.1-201ENST00000603277 287 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC012557.2-201ENST00000605919 418 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC087241.4-201ENST00000612441 480 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 AC068880.5-201ENST00000624331 290 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX1Q15475 AC008568.2-201ENST00000623862 2313 ntBASIC2.66□□□□□ -1.98
SIX1Q15475 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SIX1Q15475 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SIX1Q15475 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.65□□□□□ -1.98
SIX1Q15475 AC090740.1-201ENST00000623193 2262 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 MTND5P26-201ENST00000426018 1752 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 RNY1P12-201ENST00000364251 105 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 RNU5E-6P-201ENST00000365574 115 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 RNU6-259P-201ENST00000383999 107 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 AC080125.1-201ENST00000414888 684 ntBASIC2.65□□□□□ -1.99
SIX1Q15475 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms