Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 LRRC37A5P-203ENST00000580181 585 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AL670379.10-201ENST00000604330 253 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 APOOP1-201ENST00000604695 592 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AL670379.9-201ENST00000605428 253 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AC016727.1-205ENST00000605437 569 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AC007742.2-201ENST00000618226 398 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSRP1Q08945 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSRP1Q08945 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 ZNF519P1-201ENST00000449011 1626 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSRP1Q08945 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
SSRP1Q08945 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.38□□□□□ -1.71
SSRP1Q08945 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 NCAPGP1-201ENST00000505112 1814 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.38□□□□□ -1.71
SSRP1Q08945 RNU6-1297P-201ENST00000384415 104 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RNU1-89P-201ENST00000384592 164 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RNU6-1179P-201ENST00000384667 107 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 HMGN2P8-201ENST00000391458 268 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL360182.1-201ENST00000397433 468 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL356057.2-201ENST00000403318 432 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RN7SKP158-201ENST00000410453 326 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RNU6-607P-201ENST00000411283 108 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RPL37P10-201ENST00000412884 288 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL353621.1-201ENST00000418219 243 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.38□□□□□ -1.71
SSRP1Q08945 RPS29P7-201ENST00000439662 171 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 Z82210.1-201ENST00000440037 231 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RPL32P28-201ENST00000443577 397 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC007677.1-201ENST00000445757 515 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 MTND1P17-201ENST00000448961 204 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.38□□□□□ -1.71
SSRP1Q08945 SNORD19B-201ENST00000459623 84 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 RN7SL132P-201ENST00000478131 296 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 HMGB1P30-201ENST00000492455 606 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC022493.1-201ENST00000492984 337 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 MTND5P5-201ENST00000503764 376 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.38□□□□□ -1.71
SSRP1Q08945 RNA5SP143-201ENST00000516936 115 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC069113.1-201ENST00000517763 267 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC087854.1-201ENST00000519706 414 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.38□□□□□ -1.71
SSRP1Q08945 IGKV2D-19-201ENST00000523346 262 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.38□□□□□ -1.71
SSRP1Q08945 AC093227.2-201ENST00000589357 285 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.38□□□□□ -1.71
SSRP1Q08945 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.38□□□□□ -1.71
SSRP1Q08945 SNORD39.4-201ENST00000620099 78 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 AL031601.2-202ENST00000622650 282 ntBASIC4.38□□□□□ -1.71
SSRP1Q08945 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.38□□□□□ -1.71
SSRP1Q08945 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.38□□□□□ -1.71
SSRP1Q08945 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSRP1Q08945 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSRP1Q08945 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSRP1Q08945 Y_RNA.419-201ENST00000384041 102 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 RNU6-1197P-201ENST00000391183 107 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 RNU6-1025P-201ENST00000410629 104 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 AC018644.1-201ENST00000429934 551 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 RPS6P12-201ENST00000432491 726 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 SNAP23P1-201ENST00000433229 246 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 RNU6-1153P-201ENST00000516760 105 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 FRG2DP-202ENST00000566967 323 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.37□□□□□ -1.71
SSRP1Q08945 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.37□□□□□ -1.71
SSRP1Q08945 AL133255.1-201ENST00000606374 441 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.37□□□□□ -1.71
SSRP1Q08945 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.37□□□□□ -1.71
SSRP1Q08945 AL359693.1-201ENST00000614959 2407 ntBASIC4.37□□□□□ -1.71
SSRP1Q08945 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSRP1Q08945 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.37□□□□□ -1.71
SSRP1Q08945 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SSRP1Q08945 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SSRP1Q08945 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.36□□□□□ -1.71
SSRP1Q08945 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSRP1Q08945 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSRP1Q08945 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
SSRP1Q08945 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSRP1Q08945 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSRP1Q08945 AC007685.1-201ENST00000329806 452 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RNU6-562P-201ENST00000362731 107 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSRP1Q08945 RNA5SP424-201ENST00000390988 115 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 AC016831.2-201ENST00000417179 352 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 MTCO2P27-201ENST00000420740 428 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RPL7P2-201ENST00000427639 268 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RPS3AP52-201ENST00000435639 297 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 NDUFB4P6-201ENST00000436819 366 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 SNRPGP5-201ENST00000456003 220 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RPL30P5-201ENST00000494923 336 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RN7SKP24-201ENST00000515888 284 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RNU6-1332P-201ENST00000516666 104 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 RN7SKP209-201ENST00000516888 304 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms