Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-166P-201ENST00000384371 107 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 MIR218-1-201ENST00000384999 110 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC073614.1-201ENST00000438690 650 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 MTND1P26-201ENST00000440488 538 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN1BQ07699 BTF3P15-201ENST00000455606 336 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN1BQ07699 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN1BQ07699 RN7SL293P-201ENST00000481765 281 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 BET1P1-201ENST00000482276 359 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC023194.1-201ENST00000493084 308 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC119751.5-201ENST00000514077 770 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN1BQ07699 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN1BQ07699 ELOCP31-201ENST00000540463 467 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN1BQ07699 LINC00933-203ENST00000559812 219 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN1BQ07699 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 DEFB131E-202ENST00000602581 683 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 Z94722.1-201ENST00000604328 474 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC090578.1-201ENST00000604955 591 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AL121992.2-201ENST00000606262 256 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AL392048.1-201ENST00000613946 534 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AP001506.1-201ENST00000615444 211 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN1BQ07699 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN1BQ07699 AC135776.4-201ENST00000624300 1904 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 CKAP2P1-201ENST00000555477 2049 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AC103710.2-202ENST00000641454 2853 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SCN1BQ07699 RNU6-169P-201ENST00000365336 107 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 RNU6-297P-201ENST00000384636 107 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 RNU6-220P-201ENST00000390919 107 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AF228730.1-201ENST00000397972 663 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL356967.1-201ENST00000406305 431 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN1BQ07699 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN1BQ07699 Z98742.2-201ENST00000431564 187 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN1BQ07699 GAPDHP17-201ENST00000449858 1001 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 RPS27AP8-201ENST00000452665 445 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL583843.1-201ENST00000456070 346 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 SNORA84-201ENST00000459229 133 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 RPL9P33-201ENST00000484311 566 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC116655.1-201ENST00000508324 901 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 ACA59.2-201ENST00000517061 156 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN1BQ07699 OR5BN1P-201ENST00000532955 829 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AP002453.2-201ENST00000533503 320 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AC007834.2-201ENST00000536310 343 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC137800.2-201ENST00000574375 120 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 MIR4765-201ENST00000585007 77 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC012493.2-201ENST00000595083 291 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 SEPT7P9-203ENST00000604116 343 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL139286.2-201ENST00000606838 396 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 uc_338.25-201ENST00000613756 156 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AC034229.5-201ENST00000624258 185 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 AL157786.1-207ENST00000627771 695 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 MTND4P27-201ENST00000450813 1354 ntBASIC2.69□□□□□ -1.98
SCN1BQ07699 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN1BQ07699 AC093536.2-201ENST00000565257 1406 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN1BQ07699 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN1BQ07699 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN1BQ07699 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 MIR518D-201ENST00000385014 87 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN1BQ07699 AL160275.3-201ENST00000423876 471 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC009961.2-201ENST00000435771 251 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AC005019.1-201ENST00000436455 431 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC004383.1-201ENST00000438135 289 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AL136380.1-201ENST00000447970 162 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AC003071.1-201ENST00000451219 789 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AC006445.1-201ENST00000491925 405 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AIG1P1-201ENST00000503376 148 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 MTND4P2-201ENST00000507767 1203 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms