Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 Y_RNA.689-201ENST00000516589 107 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 RNU1-128P-201ENST00000516704 160 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 Y_RNA.701-201ENST00000516812 110 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 AP006587.4-201ENST00000526053 529 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.14□□□□□ -1.91
SEC61A1P61619 OR4H12P-201ENST00000556269 907 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 BDH2P1-201ENST00000602288 736 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 AC007687.1-201ENST00000602704 304 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 AC090574.1-201ENST00000623186 233 ntBASIC3.14□□□□□ -1.91
SEC61A1P61619 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A1P61619 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SEC61A1P61619 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 SNORA71.3-201ENST00000362582 128 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RNU6-288P-201ENST00000363690 104 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 SNORD6-201ENST00000365444 73 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 SNORA5A-201ENST00000384111 134 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 MIR200C-201ENST00000384980 68 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RNA5SP424-201ENST00000390988 115 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RPL21P17-201ENST00000397467 475 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AL139039.1-201ENST00000401900 692 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RNA5SP111-201ENST00000411386 101 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 CRYBB2P1-203ENST00000415709 538 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 YPEL5P1-201ENST00000419731 367 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RPL36AP6-201ENST00000435770 321 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 NEFMP1-201ENST00000443423 1006 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A1P61619 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 VN1R17P-201ENST00000472048 1090 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC098591.2-201ENST00000510152 315 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 FAM206BP-201ENST00000510179 541 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A1P61619 SNORA31.8-201ENST00000516327 108 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 RN7SKP256-201ENST00000517201 314 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AP001804.3-201ENST00000525146 880 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AL137161.1-201ENST00000532231 390 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A1P61619 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AC104237.2-201ENST00000612456 443 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC012409.4-201ENST00000612923 249 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 AL034408.1-202ENST00000636088 415 ntBASIC3.13□□□□□ -1.91
SEC61A1P61619 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
SEC61A1P61619 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.13□□□□□ -1.91
SEC61A1P61619 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SEC61A1P61619 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.12□□□□□ -1.91
SEC61A1P61619 TPTE2P4-201ENST00000258589 1605 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 Y_RNA.167-201ENST00000363735 109 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AL356057.2-201ENST00000403318 432 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 RPS20P15-201ENST00000412792 311 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AC091286.1-201ENST00000431233 461 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AL118496.2-201ENST00000448300 230 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 SCARNA18-201ENST00000459004 134 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC034236.1-201ENST00000469891 373 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 HMGN1P13-201ENST00000505795 138 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AC104619.4-201ENST00000510773 249 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 SNORA70.16-201ENST00000516390 95 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.12□□□□□ -1.91
SEC61A1P61619 RANP3-201ENST00000530970 276 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AP000763.2-201ENST00000540641 163 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms