Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL132838.2-201ENST00000492041 314 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.02□□□□□ -1.77
GFRA1P56159 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.02□□□□□ -1.77
GFRA1P56159 RNU6-612P-201ENST00000516909 102 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 IGLVIV-65-201ENST00000517313 360 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AC090281.1-201ENST00000523019 276 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 CASP1P1-201ENST00000526345 212 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AC010186.2-204ENST00000537668 439 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AC005476.1-201ENST00000554427 397 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.02□□□□□ -1.77
GFRA1P56159 7SK.7-201ENST00000603504 247 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 PRR13P7-201ENST00000605538 430 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 SNORD58B-201ENST00000607313 66 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 MFSD8-242ENST00000641690 4199 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.02□□□□□ -1.77
GFRA1P56159 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 AC006971.1-201ENST00000407916 4486 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
GFRA1P56159 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA1P56159 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.01□□□□□ -1.77
GFRA1P56159 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 Y_RNA.152-201ENST00000363578 100 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 Y_RNA.153-201ENST00000363615 91 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RNU6-450P-201ENST00000364654 107 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RNA5SP151-201ENST00000365632 117 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 Y_RNA.485-201ENST00000384395 102 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 MIR3065-201ENST00000390137 79 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 HMGN2P30-201ENST00000423237 256 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA1P56159 MTND3P9-201ENST00000429526 346 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RPS29P17-201ENST00000430795 166 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC011998.1-201ENST00000433403 117 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC124916.1-201ENST00000444020 547 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RPL37P4-201ENST00000448908 268 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 MTATP6P7-201ENST00000453315 681 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC006026.2-201ENST00000457376 180 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RN7SL98P-201ENST00000462271 300 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
GFRA1P56159 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC093840.1-201ENST00000511599 336 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RN7SKP46-201ENST00000515942 234 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RNA5SP497-201ENST00000516081 97 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RNU6-635P-201ENST00000516651 102 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 RNU6-703P-201ENST00000516946 107 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC022616.4-201ENST00000522985 181 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.01□□□□□ -1.77
GFRA1P56159 AC004584.2-201ENST00000570407 410 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AL158827.2-201ENST00000602494 330 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC006006.1-201ENST00000603082 144 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC016727.2-201ENST00000603988 621 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 AC138305.3-201ENST00000624988 240 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA1P56159 AL691447.3-201ENST00000635020 330 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 MIR4272-201ENST00000635924 64 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 U4.7-201ENST00000638126 106 ntBASIC4.01□□□□□ -1.77
GFRA1P56159 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.01□□□□□ -1.77
GFRA1P56159 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.01□□□□□ -1.77
GFRA1P56159 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
GFRA1P56159 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
GFRA1P56159 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA1P56159 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA1P56159 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 AL672296.1-201ENST00000427780 2158 ntBASIC4□□□□□ -1.77
GFRA1P56159 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
GFRA1P56159 RNU6-78P-201ENST00000362897 107 ntBASIC4□□□□□ -1.77
GFRA1P56159 RNU1-63P-201ENST00000383902 164 ntBASIC4□□□□□ -1.77
GFRA1P56159 RNU6-823P-201ENST00000391042 103 ntBASIC4□□□□□ -1.77
GFRA1P56159 RNU6-700P-201ENST00000391043 107 ntBASIC4□□□□□ -1.77
GFRA1P56159 U3.37-201ENST00000408528 213 ntBASIC4□□□□□ -1.77
GFRA1P56159 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4□□□□□ -1.77
GFRA1P56159 RPL26P27-201ENST00000414397 437 ntBASIC4□□□□□ -1.77
GFRA1P56159 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4□□□□□ -1.77
GFRA1P56159 AC007098.1-201ENST00000420122 367 ntBASIC4□□□□□ -1.77
GFRA1P56159 C4BPAP2-201ENST00000428434 478 ntBASIC4□□□□□ -1.77
GFRA1P56159 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4□□□□□ -1.77
GFRA1P56159 HMGB1P12-201ENST00000438594 598 ntBASIC4□□□□□ -1.77
GFRA1P56159 HIGD1AP2-201ENST00000446367 280 ntBASIC4□□□□□ -1.77
GFRA1P56159 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 RPS23P7-201ENST00000466210 444 ntBASIC4□□□□□ -1.77
GFRA1P56159 CREM-226ENST00000469949 721 ntTSL 3 BASIC4□□□□□ -1.77
GFRA1P56159 AC022795.1-201ENST00000473808 480 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC110794.1-201ENST00000505816 425 ntBASIC4□□□□□ -1.77
GFRA1P56159 NDUFB4P9-201ENST00000511646 388 ntBASIC4□□□□□ -1.77
GFRA1P56159 RNU1-103P-201ENST00000516502 125 ntBASIC4□□□□□ -1.77
GFRA1P56159 RNU6-1183P-201ENST00000517054 60 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC144568.1-201ENST00000520139 137 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms