Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 GPM6BP1-201ENST00000446387 144 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RPL26P9-201ENST00000457466 433 ntBASIC2.36□□□□□ -2.03
LIM2P55344 MRPS17P3-201ENST00000465453 385 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC233702.1-201ENST00000482905 502 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
LIM2P55344 RPS27P26-201ENST00000494583 239 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AF131216.2-201ENST00000512316 564 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.36□□□□□ -2.03
LIM2P55344 AC026407.1-201ENST00000518369 204 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.36□□□□□ -2.03
LIM2P55344 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.36□□□□□ -2.03
LIM2P55344 AC087373.1-201ENST00000524920 491 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.36□□□□□ -2.03
LIM2P55344 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.36□□□□□ -2.03
LIM2P55344 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
LIM2P55344 AC025281.1-201ENST00000567026 265 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC109446.2-201ENST00000567872 497 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.36□□□□□ -2.03
LIM2P55344 AC060766.3-201ENST00000591442 263 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC010620.2-201ENST00000600135 313 ntBASIC2.36□□□□□ -2.03
LIM2P55344 DPPA3P3-201ENST00000603842 430 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC006023.1-201ENST00000603944 259 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC004805.2-201ENST00000605382 482 ntBASIC2.36□□□□□ -2.03
LIM2P55344 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
LIM2P55344 CR848007.1-201ENST00000442354 1699 ntBASIC2.36□□□□□ -2.03
LIM2P55344 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LIM2P55344 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
LIM2P55344 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LIM2P55344 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LIM2P55344 UBE2L2-201ENST00000254302 429 ntBASIC2.35□□□□□ -2.03
LIM2P55344 RNU6-884P-201ENST00000363889 107 ntBASIC2.35□□□□□ -2.03
LIM2P55344 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LIM2P55344 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 AC096649.2-201ENST00000416186 393 ntBASIC2.35□□□□□ -2.03
LIM2P55344 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.35□□□□□ -2.03
LIM2P55344 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.35□□□□□ -2.03
LIM2P55344 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.35□□□□□ -2.03
LIM2P55344 AC104332.2-201ENST00000429959 156 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC010153.1-201ENST00000432862 727 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.35□□□□□ -2.03
LIM2P55344 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.35□□□□□ -2.03
LIM2P55344 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.35□□□□□ -2.03
LIM2P55344 USP9YP15-201ENST00000442391 422 ntBASIC2.35□□□□□ -2.03
LIM2P55344 TAF9P1-201ENST00000445421 515 ntBASIC2.35□□□□□ -2.03
LIM2P55344 MTATP6P7-201ENST00000453315 681 ntBASIC2.35□□□□□ -2.03
LIM2P55344 TAF9P2-201ENST00000454958 515 ntBASIC2.35□□□□□ -2.03
LIM2P55344 RPL12P25-201ENST00000455592 494 ntBASIC2.35□□□□□ -2.03
LIM2P55344 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.35□□□□□ -2.03
LIM2P55344 AC126389.1-201ENST00000477436 290 ntBASIC2.35□□□□□ -2.03
LIM2P55344 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
LIM2P55344 RPL39P36-201ENST00000490784 156 ntBASIC2.35□□□□□ -2.03
LIM2P55344 SEM1P1-201ENST00000506694 209 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC009901.1-201ENST00000506703 541 ntBASIC2.35□□□□□ -2.03
LIM2P55344 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.35□□□□□ -2.03
LIM2P55344 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 RNU7-51P-201ENST00000516560 62 ntBASIC2.35□□□□□ -2.03
LIM2P55344 RNU6-56P-201ENST00000516986 93 ntBASIC2.35□□□□□ -2.03
LIM2P55344 MTCO1P47-201ENST00000523889 1271 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.35□□□□□ -2.03
LIM2P55344 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.35□□□□□ -2.03
LIM2P55344 RPL21P5-201ENST00000554662 472 ntBASIC2.35□□□□□ -2.03
LIM2P55344 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.35□□□□□ -2.03
LIM2P55344 AC010653.1-201ENST00000571108 881 ntBASIC2.35□□□□□ -2.03
LIM2P55344 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.35□□□□□ -2.03
LIM2P55344 AC008739.2-201ENST00000597006 317 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.35□□□□□ -2.03
LIM2P55344 RPL12P50-201ENST00000603116 116 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AP000860.1-201ENST00000605250 559 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC006338.1-201ENST00000618453 749 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
LIM2P55344 AC110491.1-201ENST00000562191 2010 ntBASIC2.35□□□□□ -2.03
LIM2P55344 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.35□□□□□ -2.03
LIM2P55344 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.35□□□□□ -2.03
LIM2P55344 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LIM2P55344 AL136360.1-201ENST00000503377 1900 ntBASIC2.34□□□□□ -2.03
LIM2P55344 ELF2P3-201ENST00000445099 1506 ntBASIC2.34□□□□□ -2.03
LIM2P55344 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LIM2P55344 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LIM2P55344 RNU4-21P-201ENST00000362802 126 ntBASIC2.34□□□□□ -2.03
LIM2P55344 RNU6-778P-201ENST00000363269 103 ntBASIC2.34□□□□□ -2.03
LIM2P55344 Y_RNA.169-201ENST00000363745 96 ntBASIC2.34□□□□□ -2.03
LIM2P55344 RNU4-1-201ENST00000363925 141 ntBASIC2.34□□□□□ -2.03
LIM2P55344 RNU6-14P-201ENST00000384630 106 ntBASIC2.34□□□□□ -2.03
LIM2P55344 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
LIM2P55344 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.34□□□□□ -2.03
LIM2P55344 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
LIM2P55344 RPL23AP45-201ENST00000476406 468 ntBASIC2.34□□□□□ -2.03
LIM2P55344 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms