Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH11P55287 AC009969.1-201ENST00000438726 172 ntBASIC2.91□□□□□ -1.94
CDH11P55287 BNIP3P2-201ENST00000441221 577 ntBASIC2.91□□□□□ -1.94
CDH11P55287 DDX3P2-201ENST00000446138 111 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 FGF7P6-202ENST00000451282 293 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH11P55287 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 RNU6-420P-201ENST00000458780 107 ntBASIC2.91□□□□□ -1.94
CDH11P55287 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
CDH11P55287 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH11P55287 RN7SL283P-201ENST00000489055 303 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC110794.1-201ENST00000505816 425 ntBASIC2.91□□□□□ -1.94
CDH11P55287 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH11P55287 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 RNA5SP471-201ENST00000516971 106 ntBASIC2.91□□□□□ -1.94
CDH11P55287 OR4R1P-201ENST00000529879 463 ntBASIC2.91□□□□□ -1.94
CDH11P55287 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH11P55287 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 AC025165.5-201ENST00000602802 578 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AL162713.1-201ENST00000604480 262 ntBASIC2.91□□□□□ -1.94
CDH11P55287 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 MIR7112-201ENST00000616126 65 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC011155.2-201ENST00000623202 216 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH11P55287 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CDH11P55287 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.94
CDH11P55287 AC007785.2-201ENST00000598627 1916 ntBASIC2.9□□□□□ -1.95
CDH11P55287 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH11P55287 AC103710.2-202ENST00000641454 2853 ntBASIC2.9□□□□□ -1.95
CDH11P55287 RNU6-1085P-201ENST00000363576 107 ntBASIC2.9□□□□□ -1.95
CDH11P55287 SNORD115-7-201ENST00000365306 82 ntBASIC2.9□□□□□ -1.95
CDH11P55287 Y_RNA.381-201ENST00000365666 102 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL591034.1-201ENST00000407447 340 ntBASIC2.9□□□□□ -1.95
CDH11P55287 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.9□□□□□ -1.95
CDH11P55287 RNU2-33P-201ENST00000410344 192 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC092809.3-201ENST00000415453 231 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH11P55287 AC092047.1-201ENST00000424997 240 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL606489.2-201ENST00000433886 234 ntBASIC2.9□□□□□ -1.95
CDH11P55287 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH11P55287 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH11P55287 AC027673.1-201ENST00000456245 405 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH11P55287 AC083798.1-201ENST00000472671 131 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC006483.1-201ENST00000487308 313 ntBASIC2.9□□□□□ -1.95
CDH11P55287 RPL30P5-201ENST00000494923 336 ntBASIC2.9□□□□□ -1.95
CDH11P55287 SNORA40.12-201ENST00000516329 111 ntBASIC2.9□□□□□ -1.95
CDH11P55287 RNU6-835P-201ENST00000516974 104 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH11P55287 OR5AQ1P-201ENST00000527596 927 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AP005435.4-201ENST00000529514 284 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
CDH11P55287 MIR5680-201ENST00000577577 84 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC008521.1-201ENST00000587471 187 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC008752.3-201ENST00000588113 712 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL133393.1-201ENST00000603277 287 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC009570.1-201ENST00000609599 745 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AL157817.1-201ENST00000614264 790 ntBASIC2.9□□□□□ -1.95
CDH11P55287 AC025034.2-201ENST00000623264 286 ntBASIC2.9□□□□□ -1.95
CDH11P55287 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH11P55287 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDH11P55287 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH11P55287 AC093831.2-201ENST00000624393 3427 ntBASIC2.9□□□□□ -1.95
CDH11P55287 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH11P55287 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH11P55287 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDH11P55287 RNY4P14-201ENST00000363656 96 ntBASIC2.89□□□□□ -1.95
CDH11P55287 SNORA62.1-201ENST00000364287 154 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RNU6-1322P-201ENST00000364309 107 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RNU6-741P-201ENST00000383889 107 ntBASIC2.89□□□□□ -1.95
CDH11P55287 Y_RNA.534-201ENST00000384599 112 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AL590002.1-201ENST00000406554 418 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH11P55287 HMGN2P20-201ENST00000437531 273 ntBASIC2.89□□□□□ -1.95
CDH11P55287 HIGD1AP11-201ENST00000438361 280 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH11P55287 AC016691.1-201ENST00000441321 413 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH11P55287 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH11P55287 CACYBPP2-201ENST00000453625 678 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RNU7-182P-201ENST00000459009 62 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH11P55287 AL121769.1-201ENST00000469473 401 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RPL36AP51-201ENST00000487216 318 ntBASIC2.89□□□□□ -1.95
CDH11P55287 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH11P55287 AC108078.2-201ENST00000510750 236 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RN7SKP219-201ENST00000516825 296 ntBASIC2.89□□□□□ -1.95
CDH11P55287 RNU6-685P-201ENST00000517088 95 ntBASIC2.89□□□□□ -1.95
CDH11P55287 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH11P55287 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH11P55287 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms