Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 PCMTD1P7-201ENST00000634506 357 ntBASIC1.9□□□□□ -2.11
ERFP50548 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.9□□□□□ -2.11
ERFP50548 AC010329.5-201ENST00000623497 2174 ntBASIC1.9□□□□□ -2.11
ERFP50548 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
ERFP50548 MTND4P27-201ENST00000450813 1354 ntBASIC1.89□□□□□ -2.11
ERFP50548 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
ERFP50548 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.89□□□□□ -2.11
ERFP50548 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ERFP50548 RNU1-91P-201ENST00000364746 163 ntBASIC1.89□□□□□ -2.11
ERFP50548 RNU1-73P-201ENST00000383971 164 ntBASIC1.89□□□□□ -2.11
ERFP50548 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ERFP50548 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ERFP50548 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
ERFP50548 AL359704.1-201ENST00000411586 781 ntBASIC1.89□□□□□ -2.11
ERFP50548 MTATP6P20-201ENST00000414147 562 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 CYCSP48-201ENST00000417124 323 ntBASIC1.89□□□□□ -2.11
ERFP50548 USP9YP13-201ENST00000417797 480 ntBASIC1.89□□□□□ -2.11
ERFP50548 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 ELOCP14-201ENST00000428070 331 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC244035.1-201ENST00000430042 390 ntBASIC1.89□□□□□ -2.11
ERFP50548 Z98742.2-201ENST00000431564 187 ntBASIC1.89□□□□□ -2.11
ERFP50548 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 RPL35AP22-201ENST00000436855 335 ntBASIC1.89□□□□□ -2.11
ERFP50548 ELOCP7-201ENST00000439968 331 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.89□□□□□ -2.11
ERFP50548 ELOCP30-201ENST00000447108 299 ntBASIC1.89□□□□□ -2.11
ERFP50548 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
ERFP50548 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC008549.1-201ENST00000512900 643 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.89□□□□□ -2.11
ERFP50548 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.89□□□□□ -2.11
ERFP50548 MIR3167-201ENST00000579623 85 ntBASIC1.89□□□□□ -2.11
ERFP50548 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
ERFP50548 AL161798.1-201ENST00000604630 131 ntBASIC1.89□□□□□ -2.11
ERFP50548 AL158042.1-201ENST00000605338 460 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC007038.2-201ENST00000608095 740 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC018645.2-201ENST00000609151 472 ntBASIC1.89□□□□□ -2.11
ERFP50548 AL136981.2-201ENST00000617319 734 ntBASIC1.89□□□□□ -2.11
ERFP50548 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
ERFP50548 AP003400.5-201ENST00000624827 617 ntBASIC1.89□□□□□ -2.11
ERFP50548 AC097655.1-201ENST00000635075 318 ntBASIC1.89□□□□□ -2.11
ERFP50548 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERFP50548 ADAM3A-203ENST00000461344 2157 ntBASIC1.89□□□□□ -2.11
ERFP50548 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.88□□□□□ -2.11
ERFP50548 AC110491.1-201ENST00000562191 2010 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
ERFP50548 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.88□□□□□ -2.11
ERFP50548 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERFP50548 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.88□□□□□ -2.11
ERFP50548 RNU6-778P-201ENST00000363269 103 ntBASIC1.88□□□□□ -2.11
ERFP50548 SNORA4.1-201ENST00000364263 144 ntBASIC1.88□□□□□ -2.11
ERFP50548 RNU6-1176P-201ENST00000390955 107 ntBASIC1.88□□□□□ -2.11
ERFP50548 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.88□□□□□ -2.11
ERFP50548 AL353729.1-201ENST00000425044 720 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.88□□□□□ -2.11
ERFP50548 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.88□□□□□ -2.11
ERFP50548 LTV1P1-201ENST00000510683 1237 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.88□□□□□ -2.11
ERFP50548 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
ERFP50548 RNU6-64P-201ENST00000517119 105 ntBASIC1.88□□□□□ -2.11
ERFP50548 SCARNA11.3-201ENST00000517276 130 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC013828.2-201ENST00000532487 235 ntBASIC1.88□□□□□ -2.11
ERFP50548 CBX3P7-201ENST00000532876 502 ntBASIC1.88□□□□□ -2.11
ERFP50548 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.88□□□□□ -2.11
ERFP50548 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.88□□□□□ -2.11
ERFP50548 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.88□□□□□ -2.11
ERFP50548 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.88□□□□□ -2.11
ERFP50548 AL596327.1-201ENST00000603629 213 ntBASIC1.88□□□□□ -2.11
ERFP50548 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
ERFP50548 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ERFP50548 AC009269.6-201ENST00000621778 588 ntBASIC1.88□□□□□ -2.11
ERFP50548 MIR3199-2-201ENST00000636243 86 ntBASIC1.88□□□□□ -2.11
ERFP50548 U2.21-201ENST00000637295 81 ntBASIC1.88□□□□□ -2.11
ERFP50548 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ERFP50548 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERFP50548 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
ERFP50548 AC103710.2-202ENST00000641454 2853 ntBASIC1.88□□□□□ -2.11
ERFP50548 MTND5P33-201ENST00000571250 1450 ntBASIC1.88□□□□□ -2.11
ERFP50548 DDX43P2-201ENST00000604753 1354 ntBASIC1.87□□□□□ -2.11
ERFP50548 ZNF29P-201ENST00000225587 168 ntBASIC1.87□□□□□ -2.11
ERFP50548 UBE2L2-201ENST00000254302 429 ntBASIC1.87□□□□□ -2.11
ERFP50548 RNU4-68P-201ENST00000364314 141 ntBASIC1.87□□□□□ -2.11
ERFP50548 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
ERFP50548 SNORA11.4-201ENST00000408823 129 ntBASIC1.87□□□□□ -2.11
ERFP50548 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
ERFP50548 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ERFP50548 MTND1P21-201ENST00000412991 285 ntBASIC1.87□□□□□ -2.11
ERFP50548 VPS26BP1-201ENST00000417155 755 ntBASIC1.87□□□□□ -2.11
ERFP50548 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
ERFP50548 ZNF90P2-204ENST00000419323 1075 ntBASIC1.87□□□□□ -2.11
ERFP50548 AC083875.1-201ENST00000419509 405 ntBASIC1.87□□□□□ -2.11
ERFP50548 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms