Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC013410.2-201ENST00000422627 201 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AL022400.1-201ENST00000423946 935 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.36□□□□□ -2.03
CASP4P49662 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.36□□□□□ -2.03
CASP4P49662 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.36□□□□□ -2.03
CASP4P49662 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CASP4P49662 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.36□□□□□ -2.03
CASP4P49662 LARP1BP3-201ENST00000437229 869 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.36□□□□□ -2.03
CASP4P49662 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.36□□□□□ -2.03
CASP4P49662 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
CASP4P49662 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.36□□□□□ -2.03
CASP4P49662 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.36□□□□□ -2.03
CASP4P49662 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CASP4P49662 AC098591.2-201ENST00000510152 315 ntBASIC2.36□□□□□ -2.03
CASP4P49662 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
CASP4P49662 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CASP4P49662 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
CASP4P49662 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
CASP4P49662 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
CASP4P49662 RNA5SP165-201ENST00000517142 115 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.36□□□□□ -2.03
CASP4P49662 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.36□□□□□ -2.03
CASP4P49662 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.36□□□□□ -2.03
CASP4P49662 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
CASP4P49662 DPPA3P3-201ENST00000603842 430 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AL031281.1-201ENST00000604049 488 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC144521.1-201ENST00000607148 956 ntBASIC2.36□□□□□ -2.03
CASP4P49662 DUSP12P1-201ENST00000612874 516 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC025594.3-201ENST00000613068 790 ntBASIC2.36□□□□□ -2.03
CASP4P49662 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
CASP4P49662 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AL590808.1-201ENST00000618696 141 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC068057.2-201ENST00000624047 895 ntBASIC2.36□□□□□ -2.03
CASP4P49662 AC079416.3-201ENST00000624479 549 ntBASIC2.36□□□□□ -2.03
CASP4P49662 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
CASP4P49662 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CASP4P49662 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
CASP4P49662 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CASP4P49662 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CASP4P49662 RNU6-778P-201ENST00000363269 103 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.35□□□□□ -2.03
CASP4P49662 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
CASP4P49662 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
CASP4P49662 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL023284.1-201ENST00000403956 276 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL021407.1-201ENST00000404531 386 ntBASIC2.35□□□□□ -2.03
CASP4P49662 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.35□□□□□ -2.03
CASP4P49662 AL008987.1-201ENST00000415528 237 ntBASIC2.35□□□□□ -2.03
CASP4P49662 VPS26BP1-201ENST00000417155 755 ntBASIC2.35□□□□□ -2.03
CASP4P49662 ZNF90P2-204ENST00000419323 1075 ntBASIC2.35□□□□□ -2.03
CASP4P49662 SEPT2P1-201ENST00000419651 180 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL139413.1-201ENST00000421309 217 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AC104651.1-201ENST00000427559 735 ntBASIC2.35□□□□□ -2.03
CASP4P49662 MTATP6P30-201ENST00000443540 664 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.35□□□□□ -2.03
CASP4P49662 AC233279.1-201ENST00000455300 423 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 AC020699.1-201ENST00000505161 445 ntBASIC2.35□□□□□ -2.03
CASP4P49662 NDUFB4P2-201ENST00000509515 391 ntBASIC2.35□□□□□ -2.03
CASP4P49662 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CASP4P49662 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
CASP4P49662 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.35□□□□□ -2.03
CASP4P49662 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CASP4P49662 AC091544.4-201ENST00000555268 342 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AC007151.1-201ENST00000572774 483 ntBASIC2.35□□□□□ -2.03
CASP4P49662 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 AC090970.3-201ENST00000612566 866 ntBASIC2.35□□□□□ -2.03
CASP4P49662 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.35□□□□□ -2.03
CASP4P49662 AC010149.2-201ENST00000637608 315 ntBASIC2.35□□□□□ -2.03
CASP4P49662 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.35□□□□□ -2.03
CASP4P49662 AC004520.1-201ENST00000608362 1413 ntBASIC2.34□□□□□ -2.03
CASP4P49662 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.03
CASP4P49662 Y_RNA.18-201ENST00000362461 102 ntBASIC2.34□□□□□ -2.03
CASP4P49662 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
CASP4P49662 RNU6-253P-201ENST00000384730 105 ntBASIC2.34□□□□□ -2.03
CASP4P49662 ISCA1P1-201ENST00000426679 387 ntBASIC2.34□□□□□ -2.03
CASP4P49662 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.34□□□□□ -2.03
CASP4P49662 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 FABP5P15-201ENST00000453566 214 ntBASIC2.34□□□□□ -2.03
CASP4P49662 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 EIF4EP3-201ENST00000498782 656 ntBASIC2.34□□□□□ -2.03
CASP4P49662 AC107222.1-201ENST00000510899 637 ntBASIC2.34□□□□□ -2.03
CASP4P49662 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
CASP4P49662 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
CASP4P49662 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CASP4P49662 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.34□□□□□ -2.03
CASP4P49662 SNRPGP18-201ENST00000553000 214 ntBASIC2.34□□□□□ -2.03
CASP4P49662 AL354943.1-201ENST00000572103 781 ntBASIC2.34□□□□□ -2.03
CASP4P49662 AC024619.4-201ENST00000580924 316 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms