Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
CX3CR1P49238 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CX3CR1P49238 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CR1P49238 AL139276.1-201ENST00000311910 1001 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 SNORA5B-201ENST00000363786 132 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 RNA5SP125-201ENST00000364843 120 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CR1P49238 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CR1P49238 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 RNU4-72P-201ENST00000410754 173 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC078974.1-201ENST00000411597 223 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.08□□□□□ -2.08
CX3CR1P49238 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CR1P49238 AC104651.1-201ENST00000427559 735 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CR1P49238 Z98742.2-201ENST00000431564 187 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 FABP5P14-201ENST00000437273 393 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CR1P49238 AC108938.1-201ENST00000451204 136 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC106872.3-201ENST00000495104 446 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CR1P49238 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.08□□□□□ -2.08
CX3CR1P49238 RNA5SP148-201ENST00000516527 94 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 RNU6-703P-201ENST00000516946 107 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AP005902.1-201ENST00000521358 186 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CX3CR1P49238 AL121821.2-201ENST00000556081 394 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.08□□□□□ -2.08
CX3CR1P49238 MIR4293-201ENST00000584305 78 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC234772.3-201ENST00000602277 528 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC068790.3-201ENST00000602988 553 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AL355598.1-201ENST00000604169 202 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC072039.2-201ENST00000608883 439 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 TUSC7.1-201ENST00000610969 165 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 AC010678.1-201ENST00000614118 713 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
CX3CR1P49238 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CR1P49238 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CR1P49238 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CX3CR1P49238 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CR1P49238 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.07□□□□□ -2.08
CX3CR1P49238 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CX3CR1P49238 Y_RNA.97-201ENST00000363094 102 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 Y_RNA.302-201ENST00000364997 102 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.07□□□□□ -2.08
CX3CR1P49238 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 RNU6-278P-201ENST00000390945 109 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 MIR1305-201ENST00000408300 86 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC011233.1-201ENST00000422812 283 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 KLF3P2-201ENST00000465138 268 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 MRPL42P6-201ENST00000486397 371 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AC026436.1-201ENST00000510537 270 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 AP004247.1-201ENST00000531556 1289 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 MYL12BP1-201ENST00000569826 507 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CR1P49238 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CR1P49238 BNIP3P23-201ENST00000599655 511 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC073544.2-201ENST00000601155 540 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC069294.1-201ENST00000608397 350 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 PISRT1-201ENST00000626175 531 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 AC092192.1-201ENST00000633154 1018 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 MTND5P30-201ENST00000452896 1731 ntBASIC2.07□□□□□ -2.08
CX3CR1P49238 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CR1P49238 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CR1P49238 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.06□□□□□ -2.08
CX3CR1P49238 NACAP2-201ENST00000318548 624 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 RNA5SP68-201ENST00000363885 119 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.06□□□□□ -2.08
CX3CR1P49238 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.06□□□□□ -2.08
CX3CR1P49238 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CR1P49238 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CR1P49238 BX276092.3-201ENST00000424182 230 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CR1P49238 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.06□□□□□ -2.08
CX3CR1P49238 HMGB1P27-201ENST00000431429 603 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CR1P49238 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CR1P49238 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.06□□□□□ -2.08
CX3CR1P49238 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.06□□□□□ -2.08
CX3CR1P49238 GDI2P2-201ENST00000445131 608 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 RPS3P1-201ENST00000456781 192 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CX3CR1P49238 MTCYBP35-201ENST00000503630 1137 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CX3CR1P49238 SNORA31.3-201ENST00000516029 96 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 AP000907.2-201ENST00000530827 353 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 AC021269.2-201ENST00000532318 330 ntBASIC2.06□□□□□ -2.08
CX3CR1P49238 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms